Gene Daro_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3860 
Symbol 
ID3567744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4152517 
End bp4153257 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID637682334 
Producthypothetical protein 
Protein accessionYP_287058 
Protein GI71909471 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.00355604 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CCCCCCTGAT TCAACCGGCC AATGTCGGCG AAGGCGTTTA CGAAGAAGGC 
CGCGAAGGCT ATGGGCACAT CAAGAGCTAC GTGCGACGGG CAGGCCGCAT GTCCTCGGCC
CAGGAGAACT ACTACGCCGA GATGATGCCG AAGATCGGCC TGGTCTATGC ATCTCAGCCG
ATCGATCTGG CTGCCTTCTT TGGCCGGAAC AATCCGAAAG TGCTCGAAAT CGGCACGGGG
ATGGGCGAAA CCACGGCCAA GATTGCCGAT GCCAATCGCG ATATCGACTA CCTCGGCGTC
GAAGTGCATG TGCCGGGGGT TGGGGCGCTG TGCAAGCAGA TCGCCGAACG CGAGCTGACC
AACCTGCGCA TCTGCCAGCA CGATGCGGTT GAAGTGGTCC GTGACATGCT GCCGGAAGAT
TCGCTCGATG GTGTCCATGT CTTCTTTCCG GATCCGTGGC ACAAGGCCCG CCACAACAAG
CGCCGCCTGA TCCAGTCGCC GTTCGTTGCG CTGCTTGCTT CCCGCCTGAA GCCGGGTGGT
TACTTCCATT GCGCCACCGA CTGGGAAGAA TACGCGCACC AGATGCTGGA AGTGCTCTCT
GGCGAACCGA CGCTGGTCAA TTCATCGGAA GGCTTTGCCC CGCGCCCCGA TTACCGTCCG
CTGACCAAGT TCGAAAACCG AGGTTTGCGC CTCGGCCATG GCGTCTGGGA CGTCATTTTC
CGTAAAAAAC AGCTGGCATG A
 
Protein sequence
MSDTPLIQPA NVGEGVYEEG REGYGHIKSY VRRAGRMSSA QENYYAEMMP KIGLVYASQP 
IDLAAFFGRN NPKVLEIGTG MGETTAKIAD ANRDIDYLGV EVHVPGVGAL CKQIAERELT
NLRICQHDAV EVVRDMLPED SLDGVHVFFP DPWHKARHNK RRLIQSPFVA LLASRLKPGG
YFHCATDWEE YAHQMLEVLS GEPTLVNSSE GFAPRPDYRP LTKFENRGLR LGHGVWDVIF
RKKQLA