Gene Daro_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3848 
Symbol 
ID3568019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4141925 
End bp4142791 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID637682322 
Producthypothetical protein 
Protein accessionYP_287046 
Protein GI71909459 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGTA GTATGACTGG TTATGCCGTT AAAACGCGCG ATATTGAGCG CGGAACACTG 
CAACTTGAGC TTAAAAGCGT CAATTCCCGC TATCTCGATT TTCATTTCCG CGTCAGTGAT
GAATTGCGCT CGCTGGAAAT GCCCCTGCGT GAATTGCTGG CCGCGAGATT ATCACGCGGC
AAAGTGGAAT GCCGACTCTC TTTCAATGCC TCGGCGGCCC GTGCCGATCA GCTGCAACTC
AATGGCGAAC TGCTCGCGTC ACTGAAGCTG CTGAGCGAGC GTGTGCGGCA TGAAATGCCC
GATGCCAGCC CGCTATCGGT CAACGAAACC CTGCGCTGGC CAGGCATGTT CGGCGACCAA
AGCGTCGATT TCGCTGCTTT TGGACCGGTC GTCATGGCGC TGGCGCGCGA GGTGCTCGAT
GAATTTACCG CCAGTCGGGG GCGCGAAGGC GACAAGCTGG CGGCGATGAT CGTCGAGCGC
GTCAATGGCA TGCGCGACAT CGTGCGCCGG GTGGCACCCC GTATTCCTGA AGCCCAGGCG
ATATTCACCG ACAAGCTGCG TCAACGTTTG ACCGAAGCGC TGGGCAACGC CAGTGACGAT
CGCATCCTGC AGGAAGTGGC CGTTTTCGCG ACCCGAATCG ATGTCGCCGA AGAGCTTTCA
CGGCTGACTA CCCACCTCGA TGAAGTCGAG AGGGTGCTGA AGCAGGGGGG CGCCTGTGGC
AAGCGCCTCG ATTTCCTGAT GCAGGAACTC AATCGTGAAG CCAATACCCT GGGCTCCAAG
TCGGCAATTA CCGAGGTTTC ACAGGCGTCG ATGGATCTCA AGCTGCTGAT CGAACAGATG
CGCGAACAGA TCCAAAATTT GGAGTGA
 
Protein sequence
MICSMTGYAV KTRDIERGTL QLELKSVNSR YLDFHFRVSD ELRSLEMPLR ELLAARLSRG 
KVECRLSFNA SAARADQLQL NGELLASLKL LSERVRHEMP DASPLSVNET LRWPGMFGDQ
SVDFAAFGPV VMALAREVLD EFTASRGREG DKLAAMIVER VNGMRDIVRR VAPRIPEAQA
IFTDKLRQRL TEALGNASDD RILQEVAVFA TRIDVAEELS RLTTHLDEVE RVLKQGGACG
KRLDFLMQEL NREANTLGSK SAITEVSQAS MDLKLLIEQM REQIQNLE