Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3846 |
Symbol | |
ID | 3568017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4137749 |
End bp | 4140331 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637682320 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_287044 |
Protein GI | 71909457 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTAG CCAGCCGGTT TTCGTCGCTA TCCGCCACGG CACTTACCCG GCGGTTTGTG ATCGGCTGGT TGATTGTCGT TTTATCGGTC GTGGCGCTGG TTGCCTATTT CGTGCGCGCC AGTTTCGAGC AGCAAAAGCA ACGGACGCTG CTTGAAGTCG AGAATCTATC GATGTTGCTT GAGCGCGATA TCGCGGCCAA TCTGGAAAAG GTTGATCTCA TCCTGCGCGT CGCTATTGAC GAGTATGCGG GGTTGAAAGA AAAAAAGGCG GTCGATGCGG TGACGGTGGA CCGCTTCCTG GCTCGCCAGC GTGATCGGCT CAAGCCCTTG GTGGCGCTGC GGATTGCCAA TGCAGCCGGG GAGGTTATCC TGGGTACCGA TGGCGGAACG GGGTCGAACG CCATGATCGA CGACCGCGAA TATTTCAGGC AATTGCGGGA CGACCCCGCG GCTGGTCTGC TGATCTCGAA GCCGATACGC GGGCGGATCA GTGGCAAATG GGCGATCATT CTGGCGCGCC GCTTGCCCGA TGTTGGCGGC CATTTTTCCG GAATTGCCCT GGCCAGTGTC GGACTGGATA ACTTTACCCA TCAATTCACG GCGCTTCAGA TGGGGCCGCG TGGATCGGTT GCCATGCGGG CCGCTGATCT TTCCTTGCTG GCCCGGGTGC CTTGGGACGA GGCGGTCGCA GAATACGGCT CGACGAAGAT TTCGCAAGAT TTTCAGCGTG CGCTGGCGGC TGATCCTGGG GCTGGCGTTT ATTTCTCAGG GGCGACCAGT CTTGATGGCG TTCATCGTCT GCATGCCTAC CGCTTCAATT CGGACTACCG GTTCTACATC AATATCGGTG TGCCGGAGGA CTCCTATCTT GCCCCCTGGC ATCACCAGTT GTATGGGGTC TTGGCCATGC TGGCGCTGTT TCTGGCACTC AGTGGCGGGA CTGTCTACCT GCTGCACGGT TATGCCAGCA GGCTCGGTGA GCGCGAGCGA ATGCTGCGGA CCATTTTCGA TACGTCGGAT GGCGCAATTT TTCTGGTCGA TCCGGCCGGA AAAATCGTGC TGGCTAATGA ACGGATGGCG ACAATGTGGG ATGTGCCGCT GGCCGAGTTG GTCGGTAGCG AGTATGTATC GCTGATTCAT CCGGCGGAGA GGGAATTCGG GCGGGAGAGA ATGCTGAAGC TGATGGCCAG CGAGATTCCC TTCGTCCGTC TGGAGCGGGA ATACGTCAAG CGTGACGGCA CGGTTTTCTG GGGCTTCCTG TGTGGTCGGC GTCTGCTTGA CGAGCAGGGG AAATTCGTCG GACTGGTTGG CCTGATCGCC GATATCGACG AGCCGAAGCG CAATGCCAGG GAACTGGAAA CCTATCGTCA GCATCTGGAA GATCTTGTGC GGGAGCGCAC GGCGCAACTG GAGGGGGCAA AGGATGCCGC TGAGTTGGCC AATCGTGCCA AGAGCGCTTT CCTTGCCAAC ATGAGCCACG AGATAAGGAC GCCGATGAAT GCAATTGTCG GCTTTGCCCA TTTGCTTCGG CGCGATGGCG TTACGCCGAA GCAGGCGGAC CGTCTCGACA AGATCATGGG CTCGGCGGAG CACCTGCTGG CGATCATCAA CGATGTGCTC GATATCTCGA AAATTGAATC GGGCAAATTG GTGCTGGAGG CCAAGCCTTT CCGTGTCGTC GATGTGGTCG AGCGACTGGT CGGCTTGTGT GCAGAGCGGG CGCAGTCCAA AGGCCTGGCT TTCAGAACCA TGGTTGGCGC CTTGCCGCCG GTACTGGTCG GCGATTGCAC GCGACTGAGC CAGGCCTTGC TCAACTACGT CGGCAATGCG ATCAAGTTTA CCGAGGCCGG CACGATCACG CTCCGGGCTG AGGTGCTTGA AGAGGATGCG CATTCCCTGC TGGTCCGTTT TGAGGTTCAG GATACCGGTA TCGGTATTGC CGGCGATGTA TTGTCCCGGC TGTTTCGCCC CTTTGAGCAG GCCGATAATT CGACGACCCG AAAATACGGC GGCACTGGGC TTGGCCTGGC GATTACCCTG CGTCTGGCAG AGTTGATGGG AGGTCAGGCG GGCGTGGACA GTGAGGCGGG GGTCGGTAGC ACCTTCTGGT TGACGGCGCG TTTTGGCAAG GCAAATTCCG CTGAGCCGGG GGGCTTGGCC GGGCAATCCG GGAGGGCGCC AGCTGCAGGT TCGACTTTGC GCAGGGCGCA TATCCTGCTG GTTGAGGATG ATCCGCTGAA TCGCGAGGTG GCTGCCATTC TTGTTGAAGA GATGACGGGG GTGCCGGTCG ATCTGGCCGA TTCTGCCGAG CAGGCCATCG CCAAGGTGCA GGCGACGGCC TACGACCTGA TTCTGATGGA CCTGCTGATG CCCGGCATGG ATGGTCTGGA GGCCACCAGG CGCATACGGG CCTTGCCGGG TTACGCGACG ACACCGATCA TTGCGCTGAC CGCCAATGCC TTTGCCGAAG ACCGGGAGCG TTGCCTGGCG GCCGGGATGA ATGACCATCT GGGCAAGCCG GTCGTCCCAG AGCGCCTGCA GGCCGTACTC GAACACTGGT TGGCGCCGGG GTCGCTACAA TAA
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Protein sequence | MQLASRFSSL SATALTRRFV IGWLIVVLSV VALVAYFVRA SFEQQKQRTL LEVENLSMLL ERDIAANLEK VDLILRVAID EYAGLKEKKA VDAVTVDRFL ARQRDRLKPL VALRIANAAG EVILGTDGGT GSNAMIDDRE YFRQLRDDPA AGLLISKPIR GRISGKWAII LARRLPDVGG HFSGIALASV GLDNFTHQFT ALQMGPRGSV AMRAADLSLL ARVPWDEAVA EYGSTKISQD FQRALAADPG AGVYFSGATS LDGVHRLHAY RFNSDYRFYI NIGVPEDSYL APWHHQLYGV LAMLALFLAL SGGTVYLLHG YASRLGERER MLRTIFDTSD GAIFLVDPAG KIVLANERMA TMWDVPLAEL VGSEYVSLIH PAEREFGRER MLKLMASEIP FVRLEREYVK RDGTVFWGFL CGRRLLDEQG KFVGLVGLIA DIDEPKRNAR ELETYRQHLE DLVRERTAQL EGAKDAAELA NRAKSAFLAN MSHEIRTPMN AIVGFAHLLR RDGVTPKQAD RLDKIMGSAE HLLAIINDVL DISKIESGKL VLEAKPFRVV DVVERLVGLC AERAQSKGLA FRTMVGALPP VLVGDCTRLS QALLNYVGNA IKFTEAGTIT LRAEVLEEDA HSLLVRFEVQ DTGIGIAGDV LSRLFRPFEQ ADNSTTRKYG GTGLGLAITL RLAELMGGQA GVDSEAGVGS TFWLTARFGK ANSAEPGGLA GQSGRAPAAG STLRRAHILL VEDDPLNREV AAILVEEMTG VPVDLADSAE QAIAKVQATA YDLILMDLLM PGMDGLEATR RIRALPGYAT TPIIALTANA FAEDRERCLA AGMNDHLGKP VVPERLQAVL EHWLAPGSLQ
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