| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3829 |
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| Symbol | |
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| ID | 3568188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4119494 |
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| End bp | 4120657 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637682303 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_287027 |
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| Protein GI | 71909440 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 0.192626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GCCAAAAACG CCTCGTCCTC GCCGCCGCCC TGGCCGCCCT GTTCAGCCTC
GGTGGCGGTC TCGCCCTCTA TCACGGCCAC GCCGGCGCCG CCCCGGCCGC TGCCGCGCCG
GCCGCCGCCA CGGTCGATGT CGCCGAAGTC GCCAGCCGCG CCGTGACCGA GTGGCAGCAA
TACTCCGGCC GCCTCGAAGC CGTCGAACGG GTCGAGATCC ACCCGCAGGT GTCCGGTATT
CTGACCGCCG TGCATTTCAA GGACGGCAGT CTGGTCAAGA AAGGCGAGCT GCTGTTCACC
ATCGACCCGC GCCCCTTCGC CGCCGAAGTT GCCCGTGCCG AAGCCCAGCT CGCCGCAATG
GACGCCCGCG TCGCCTACAC CGCCAGCGAC CTGGCGCGCG GCGAACGGCT GCTGGCCGAA
AACGCCATCG CCCGTCGCGA TTTCGACGAG AAGCAGAACG CCGCCCGCGA AGCCAAAGCC
AACCTGCAGG CCGCCAGGGC GGCGCTCAAG GTCGCCCAGC TCAACCTCGA ATACACCCGC
ATCACGGCGC CGATCGCCGG CCGCGTCTCG CGCGCCGAAG TCACGGTCGG CAACCTGGTC
GCTCCCGGCA ACGGCCCGGC CCTGACATCG CTGGTCTCGG CCGACCGCAT CTACGCCGCC
TTCGATGTCG ACGAGCAGAG CTATCTCAAG GTGGTCAACG GCAGCCAGGG CAAGGCCCTG
CCCATCCACC TCGGGCTGGC CGACGACGAG GGTTACTCGC GGGAAGGCAA GCTGAGTTCG
GTGGACAACC GCCTCGACAG CACCTCCGGC ACCATCCGCC TGCGCGCCCT GGTCGACAAC
CCGGACGGCA AGCTGGTCCC CGGCCTCTAC GCCCGCATCC GGCTCGGCGC CGCCGGCCAG
CGCGACGCGC TGCTGATCGA CGAGAAGGCG GTCGGCACCG ACCAGGCCAA GCGCTTCGTG
CTGGTGGTCG GCGAAGGCAA CCAGACCGCC TATCGCGAAG TGCAGCTGGG CAGCGTGCAG
GATGGTCTGC GCGTCGTCGA AAGCGGCCTC AAGGCCGGCG AACGCATCGT GGTCAACGGC
CTGCAGCGTG TGCGTCCGGG CGACCAGGTC ACACCCAATA TCGTGCCGAT GGGCGGCGTT
GCGCCGGCCG CAACCAAGGG CTGA
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| Protein sequence | MPKRQKRLVL AAALAALFSL GGGLALYHGH AGAAPAAAAP AAATVDVAEV ASRAVTEWQQ
YSGRLEAVER VEIHPQVSGI LTAVHFKDGS LVKKGELLFT IDPRPFAAEV ARAEAQLAAM
DARVAYTASD LARGERLLAE NAIARRDFDE KQNAAREAKA NLQAARAALK VAQLNLEYTR
ITAPIAGRVS RAEVTVGNLV APGNGPALTS LVSADRIYAA FDVDEQSYLK VVNGSQGKAL
PIHLGLADDE GYSREGKLSS VDNRLDSTSG TIRLRALVDN PDGKLVPGLY ARIRLGAAGQ
RDALLIDEKA VGTDQAKRFV LVVGEGNQTA YREVQLGSVQ DGLRVVESGL KAGERIVVNG
LQRVRPGDQV TPNIVPMGGV APAATKG
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