| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3821 |
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| Symbol | |
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| ID | 3568180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4105108 |
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| End bp | 4107387 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637682295 |
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| Product | Cache sensor hybrid histidine kinase |
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| Protein accession | YP_287019 |
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| Protein GI | 71909432 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0769557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT TTCGGCTTGG CAGCTTGAGA GTTCGACTGC TGGCGATGCT TGCAGCACCG
CTAATGGTGA TTTTTGCTGC CATGTTTCTG GTTACGTTGT ACGAGCGCGA ACGGCGTATC
GAGAGTGCGC TGGAGCAGCT TCAACGAACG GCTGGTCAGC TGGTGGCAGA GCAGGCTCGG
AACGTCGTGG AAATCAAAGA GCTGCTCGCG AGGCTCATGA CCGTTGATGC GATTCAAGGC
TATGCGACCC AGCCCGGTCA TTGTTCGGAA CTTCTCGCCA ATGAGTTGAA GGCGCAGCGA
CGATTGGTGA ATATCGGGGT TGTGGACTTG GATGGGCAGT TGCTTTGCAG CGCGGTATCA
GGCTCGGAAT CGCTCAATGT TGCTGACCGC GGATATTTCA TTAATGCGCT GAAAGAGCGC
GATTATGTCA TTGGCGGACC ACACGTTGGC AGGAGAGTGG GGCGGCCTGT TATTCCCATC
GCTGTCGCGC TCCGCGATTC CTCTGGCAAG GCAATTGGCG TCATCTTTGC CTCGTTGGAT
GTCGGTTGGC TCAACAATGA GTTGGCCAAG ATAAGCCGGC CGGAAACATC GAGGCTGGGA
CTAATTGACA ATCAGGGCTA CGTGCTGGCC CGTCATCCCG ACCCGGAGGG CTGGGTCGGT
CGGAGTGCTG CGGAAACTTC CTTCTTCAAG ATGCTGATCC AGCACGGCGG TAGCGGACTG
GCGGAAGAGG TCGGATTCGA TGGCGTGCCC CGTATCTACG CGTTGGCAAG ATTTACCGAT
ACCCTGGACG GGCCGATCCA TTTTTGGCTT GGCGCGGACA AGGAGAGCGT GACGGCTGCA
ATTGACCGGC AGTTGGTACG TACCATAGCC GTCAGTGCCG CATTGATGCT GGGCTTCCTG
TGTCTGGCAT GGTTCATCGC TGACCGCTGG CTTGTGAAGC CTATTCTGGC CGTCGCCACC
GCTGCCAGGC GACTTCGCAG CGGCGACCTC GATGCCCGTA CTGGTCTGAG GCGGAGCAAC
GATGAGCTAG GGGAGTTGCT GGAAGCTTTC GATCACATGG CAGAAGATTT GGCAGAAAGT
GACCGAAACC TGCGTCGGCA AGCGGTCGCT CTGGAGCGGG CCAAAGGCGA TGCAGAAGCT
GCCAGCGCCG CCAAGAGCAC CTTCCTCGCC AACATGAGCC ACGAAATCCG CACGCCGCTG
AACGGCATCC TCGGCATGGC GCATCTCATC CGTCGCGGCG GCCTCACGGA CGAGCAGGCG
AAGCGTATGG ATACGCTTCA GGTATCGAGC GAACATCTGC TGAATATCAT CAATACCATC
CTCGAACTGT CAAAGATCGA GGCCGGCAAG TTTGTTCTGG AGGAAACGAG CGTCAGGATA
GAAACCCTGA TCGCCAACAT CGCTTCGATA CTCCAGGACC GGATACAGGC CAAACACTTG
GTGCTGCGCA CGGAAGTCGG CGCTCTGCCG GCCAACCTGC TGGGTGATGC CACCCGTATC
CAGCAAGCGC TGCTCAATTA TGCCGGTAAC GCCGTCAAAT TCACCGAGAC CGGCAGCATC
GCCCTGCGAG TACTTCCGCT CGAGGAGGAT GCGGATAGCG TCCTGATCCG CTTTGAAGTT
CAGGATACTG GCATCGGCAT CGCCCCGGAG GTCATGCCCA AGCTCTTTAC CGCCTTCGAG
CAGGCGGATG CCACATCGAC CCGCAAGTAC GGTGGCACTG GCTTGGGGCT GGCAATCACG
CAGAAGATCG CCAAACTGAT GGGCGGCGAT GCTGGCGTGG AAAGCACCCT CGGCGTGGGC
AGCACCTTCT GGTTCTCCGT CCGACTGAAG AAGGGTAAGC AGGCTTCCGC CATGTACGGT
AATCAGCCGA TGGCCGAGGA AATCCTGAAG CGCGATTACC GAGGCGCACG CATCCTGCTG
GCTGAAGATG AACCCATCAA CCGCGAGGTC GCCCAGATCA TGTTGAACGA TGTGGGGATG
GCGGTCGATG TCGCGGAAGA TGGCATCGCT GCGCTCAGGC TGGCCGGTGA GGTCGACTAC
GCCCTGATCT TGATGGACAT GCAGATGCCC AACATGAATG GCCTTGATGC AACCCGGCAG
ATTCGCCAGC TGCCCCGGCA CAAGGAGACT CCGATTCTGG CGATGACCGC GAACGCCTTT
GTCGAGGACA AGGAAAGGTG CTTCGAAGCC GGCATGAACG ACTTTATCGC CAAGCCAGTC
GAGCCCGAAT CGCTCTACGA CAAGCTGCTC CATTGGCTTT CACGCGGGCC GTCACACTGA
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| Protein sequence | MTAFRLGSLR VRLLAMLAAP LMVIFAAMFL VTLYERERRI ESALEQLQRT AGQLVAEQAR
NVVEIKELLA RLMTVDAIQG YATQPGHCSE LLANELKAQR RLVNIGVVDL DGQLLCSAVS
GSESLNVADR GYFINALKER DYVIGGPHVG RRVGRPVIPI AVALRDSSGK AIGVIFASLD
VGWLNNELAK ISRPETSRLG LIDNQGYVLA RHPDPEGWVG RSAAETSFFK MLIQHGGSGL
AEEVGFDGVP RIYALARFTD TLDGPIHFWL GADKESVTAA IDRQLVRTIA VSAALMLGFL
CLAWFIADRW LVKPILAVAT AARRLRSGDL DARTGLRRSN DELGELLEAF DHMAEDLAES
DRNLRRQAVA LERAKGDAEA ASAAKSTFLA NMSHEIRTPL NGILGMAHLI RRGGLTDEQA
KRMDTLQVSS EHLLNIINTI LELSKIEAGK FVLEETSVRI ETLIANIASI LQDRIQAKHL
VLRTEVGALP ANLLGDATRI QQALLNYAGN AVKFTETGSI ALRVLPLEED ADSVLIRFEV
QDTGIGIAPE VMPKLFTAFE QADATSTRKY GGTGLGLAIT QKIAKLMGGD AGVESTLGVG
STFWFSVRLK KGKQASAMYG NQPMAEEILK RDYRGARILL AEDEPINREV AQIMLNDVGM
AVDVAEDGIA ALRLAGEVDY ALILMDMQMP NMNGLDATRQ IRQLPRHKET PILAMTANAF
VEDKERCFEA GMNDFIAKPV EPESLYDKLL HWLSRGPSH
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