| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3820 |
|---|
| Symbol | |
|---|
| ID | 3567976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 4103332 |
|---|
| End bp | 4104837 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637682294 |
|---|
| Product | methane/phenol/toluene hydroxylase:YHS |
|---|
| Protein accession | YP_287018 |
|---|
| Protein GI | 71909431 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 0.898066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0706856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGC TTAATAGAAT GGACTGGTAC GACCTGGCCA GGACTACCAA CTGGACGCCC
AAGTACGTGA CCGAAGATGA ACTCTTCCCG CCACTGTTGG CAGGGGATTT CGGTCTGCCG
CAAAACGCCT GGGAAAAATA CGACGAGCCG TACAAGCAGA CCTACCCGGA ATACGTGAAG
GTCCAGCGCG ACAAGGATGC CGGTGCCTAC TCGGTGAAAG CTGCGCTGGA GCGTAGCCGG
ATTTACGAAA ATGCCGATCC GGGCTGGAAG TCGGTCATGA AGGCCCACTA CGGCGCCATC
GCCCGCGGCG AATATGCCGC GGCCAGTGCC GAGGCCCGCA TGATGCGCTT CTCCAAGGCG
CCGGGCATGC GCAACATGTC GACGCTGGGT TGTCTGGATG AAATCCGCCA CGGCCAGATG
CAGCTCTACT TCCCGCACGA GCACGTCTCC AAGGATCGTC AGATGGACTG GGCCTTCAAG
GCCTACGACA CCAACGAGTG GGCGATGATC GCGGCCCGTC ACTTCTTCGA CGACATCATG
ATGACCCGCG ACGCGATCAG CGTCTCGATC ATGTTGACCT TCAGCTTCGA AACCGGCTTC
ACCAACATGC AGTTCCTCGG CCTGGCGGCC GATGCCGCCG AAGCGGGCGA TCACACCTTT
GCCAACCTGA TCTCCAGCAT CCAGACCGAC GAGTCGCGTC ATGCCCAGAT CGGCGGCCCG
GCGCTGAAGG TGCTGATCGA GAACGGCCAC AAGGCCGAGG CGCAGAAGCG CGTCGACATC
GCCGTCTGGG GCGCCTGGAA GCTGTTCTCG GTGCTGACCG GTCCGATCAT GGATTACTAC
ACCCCGCTCG AGCACCGCAA GCAGTCGTTC AAGGAATTCA TGGAGGAATG GATCGTTGCC
CAGTTCGAGC GCGCCCTGAC CGACATGGGC CTCGATTTGC CCTGGTACTG GGACATCTTC
CTGAAGGACA TCGCCCAGAC CCACCACGGC ATGCACCTCG GCTCCTATTT CTGGCGCCCG
ACCCTGTGGT GGAACCCGGC CGCCGGCGTG ACGCCGGACG AGCGGGCCTG GCTGGAAGAG
AAGTATCCCG GCTGGAACGA TACCTGGGGT CAGTGCTGGG ATGTGTTCAT CGACAACGTG
GTCGACGGCA ACATGGCCAT GACCTATCCG GAAACCCTGC CTTACGTCTG CAACATGTGT
CAGCTGCCGA TCCTCGGCAC GCCGGGCAAG GGCTGGAACG TCAAGGACTA CCCGCTCGAA
TACAACGGTC GCCTCTATCA CTTCGGTTCC GAAGTCGACC GCTGGGTCTT CGAGCAGGAG
CCGGAACGCT ACGCCGGCCA CCTGTCCATC GTCGACCGTT TCCTGGCCGG GATGATCCAG
CCGATGGATC TGGGCGGGGC GCTGCAGTAC ATGAACTTGG CGCCCGGCGA GATCGGCGAC
GACGCCCACA ACTATGCCTG GGCCGAAGTG TACCGGGCCA TGCGGGCTGC CAAGAAGGCT
GGCTGA
|
|---|
| Protein sequence | MAVLNRMDWY DLARTTNWTP KYVTEDELFP PLLAGDFGLP QNAWEKYDEP YKQTYPEYVK
VQRDKDAGAY SVKAALERSR IYENADPGWK SVMKAHYGAI ARGEYAAASA EARMMRFSKA
PGMRNMSTLG CLDEIRHGQM QLYFPHEHVS KDRQMDWAFK AYDTNEWAMI AARHFFDDIM
MTRDAISVSI MLTFSFETGF TNMQFLGLAA DAAEAGDHTF ANLISSIQTD ESRHAQIGGP
ALKVLIENGH KAEAQKRVDI AVWGAWKLFS VLTGPIMDYY TPLEHRKQSF KEFMEEWIVA
QFERALTDMG LDLPWYWDIF LKDIAQTHHG MHLGSYFWRP TLWWNPAAGV TPDERAWLEE
KYPGWNDTWG QCWDVFIDNV VDGNMAMTYP ETLPYVCNMC QLPILGTPGK GWNVKDYPLE
YNGRLYHFGS EVDRWVFEQE PERYAGHLSI VDRFLAGMIQ PMDLGGALQY MNLAPGEIGD
DAHNYAWAEV YRAMRAAKKA G
|
|---|
| |