| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3798 |
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| Symbol | |
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| ID | 3567954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4082405 |
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| End bp | 4084081 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637682273 |
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| Product | helix-turn-helix, Fis-type |
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| Protein accession | YP_286997 |
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| Protein GI | 71909410 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 0.852136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00299193 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACCA TTCAGTACCC CGAGTCGAAT GACCTGCGCA ATCTGGTCAA GTTTTGCGAA
AAGGATGGAA CGATCTGGCT GGCCGAGAAC CGCATGGTCC TCATGCATAC CTCGGCACTC
GGCGCCTTGC GCCGCGAACT GGTCGGCTCG GTTGGCAAGG AACACGCCCG CCGCCTGCTG
ACCCGCATGG GCTACGCCGC CGGTGTCTGC GATGCCGAAC TGGCCAAGCG CATCCGCGGC
AACCTGTCGA TGCAGGACGC CTTCTTCACC GGCCCGCAAC TGCACATGCT CGAAGGTATC
GTGCGCGTCA CGCCGGTGCA CATGAACCTC GATTTCGACA AGGGCACCTT CTCCGGTGAG
TTCCTGTGGG AAAACTCCTG GGAGCAGGAC ATCCACCTGC GCGAACTCGG GCAGTCGGAT
GAACCGGTCT GCTGGTCGCA GATCGGCTAT GCCTCGGGCT ACACCTCGGC CTTCATGGGG
CGTTTCATCC TGTTCAAGGA AATTGAATGC GTGGCCTGCG GCCACAACAA CTGCCGCATC
GTCGGCAAAC CGCTGGAAGA ATGGGAAGAC GCCGAGCAGC ACGCCAGCTA TTTCGAATCC
GATTCGATGC TCAACCATCT GCTGGAACTG CGCCACCAGG TCGACTACCT GCGCACCACC
ATTTCGCAGC AGACCCAGAC GCCCCAGCTG GTGGGCAATT CCAAGGGCTT CCAGCACGCC
TACGACCTCG TCACCCGCGC CTCGGGTACC CAGGTCACCG TGCTGCTGCT TGGTGAAACC
GGCGTCGGCA AGGAACGCTT CGCCCGCACA CTTCACCAAA TGAGCAACCG CAAGCAGGGG
CCGTTCGTCG CGGTCAATTG TGCGGCCATG CCCAATGACC TGATCGAATC CGAATTGTTC
GGCGTCGAGA AAGGCGCTTT CACCGGCGCC CATACCTCGC GCATGGGCAA GTTCGAGCGG
GCGGACGGTG GCACCCTGTT CCTCGACGAG ATCGGCGAAC TGCCGCTCGC CGCCCAGGCC
AAGCTGCTGC GCGTGCTGCA GGAAGGCGAG ATCGAACGCC TGGGCGACGA CCGGGTACGC
AAACTGAACA TCCGCCTCGT CGCCGCCACC AACGTCGACC TGCAGGCCGC CGTCAAGGCC
GGGCGTTTCC GCTCCGATCT CTTTTACCGG CTGAGTGTCT ATCCGATCCA GATCCCGCCG
CTGCGCGAAC GCATCGCCGA CATCCCGCTG CTGATCGAAG CCATGCTCGC CCGCTTCAGC
ACGCTCTATG AAAAGAAACT GCTCGGCGTC AGCGACAAGG CGATGCAGGC CATCAAGCGC
TATCAGTGGC CGGGCAACGT GCGCGAACTG GAAAACATGA TCGAGCGCGG CATGATCCTC
GCCCCCAACG GCGGCTGGAT CGAACAGGAA CACCTGTTCG CCAATGTCGC CGAAAGCGAT
TTCAGCGAAG CGCAGATCAC CCAGGCCGGC AGCCTGGAGC GAAAACAGGA ACCCGGTGCC
CCGGATAGCC TGATCGAAGC CATTTTCAGC AGCGGCATTG GTTTCGAGGA ACTGGGAAAC
CAGCTGATCA ACGAGGCCGT CAAACGCGCT GACGGCAACC TGGCCGGCGC GGCCCGCACG
CTAGGCATCA CCCGGCCGCA ACTGCAATAT CGCCTGAAAA AGAAGGACGG CGTCTGA
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| Protein sequence | MTTIQYPESN DLRNLVKFCE KDGTIWLAEN RMVLMHTSAL GALRRELVGS VGKEHARRLL
TRMGYAAGVC DAELAKRIRG NLSMQDAFFT GPQLHMLEGI VRVTPVHMNL DFDKGTFSGE
FLWENSWEQD IHLRELGQSD EPVCWSQIGY ASGYTSAFMG RFILFKEIEC VACGHNNCRI
VGKPLEEWED AEQHASYFES DSMLNHLLEL RHQVDYLRTT ISQQTQTPQL VGNSKGFQHA
YDLVTRASGT QVTVLLLGET GVGKERFART LHQMSNRKQG PFVAVNCAAM PNDLIESELF
GVEKGAFTGA HTSRMGKFER ADGGTLFLDE IGELPLAAQA KLLRVLQEGE IERLGDDRVR
KLNIRLVAAT NVDLQAAVKA GRFRSDLFYR LSVYPIQIPP LRERIADIPL LIEAMLARFS
TLYEKKLLGV SDKAMQAIKR YQWPGNVREL ENMIERGMIL APNGGWIEQE HLFANVAESD
FSEAQITQAG SLERKQEPGA PDSLIEAIFS SGIGFEELGN QLINEAVKRA DGNLAGAART
LGITRPQLQY RLKKKDGV
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