| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3770 |
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| Symbol | |
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| ID | 3567503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4055502 |
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| End bp | 4056488 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682245 |
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| Product | PAS:GGDEF |
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| Protein accession | YP_286969 |
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| Protein GI | 71909382 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0223226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGA TGTCTAGTCG AAAACCGGCT AATCAGTCTC AAGAGTTGAG TTTTGCCGTA
AACCTGATGG AGCATCTGGT GGTGCCGACC TTTGTGGTGG ACGCCGCTTG TCGGGTGCTG
ATCTGGAATC GGGCCTGCGA ACGACTGACC GGCGTGATGG CCTCAGAGGT GGTGGGTACC
GTCGATCACT GGCAGGCTTT CTACGACGAG CCCCGCCTGT GCCTGGCCGA TGCGCTGGCC
AAGGGAATGA CGGCCGATCT GGACCGCCTC TATTCCTACC ATACCGAACC CTCCGAGCAT
GGTCATGGCA TGAAGGCCGA GAACTGGTGC GTGATGCCGA AGATGGGTGA GCGCCTGTAT
CTGGCGATCG ACGCCGGACC GATCTATGCC GACGATGGCC AGCTGGTTGC CGTTGTCGAG
ACACTGCGCG ACATGACTGA TTACAAGAAC GCCCAGATGG CCTTGCAGCA GCAGGCCACG
ATGGACGGTC TGACGGGACT GGCCAACCGC CGCAGTTTCG ATGAGAAGCT GCATGTCGAA
TGGAGCCGGT CGCAGCGCTA CGGCGAGCCG ATTGCGCTGA TTTTGGCTGA CGTGGACTAT
TTCAAGCGCT ACAACGACTG CTACGGCCAT CAGGGTGGCG ATGAATGCTT GAAGGCCGTG
GCTGGTATTC TGCGGCGCGA GGTTTTTCGG CCGACCGACA TGGCGGCGCG CTATGGTGGC
GAGGAATTCG CGATCATTCT GCCCGGGACG GATTTGCAAG GCGCCCTGAC CGTGGCCGAG
CGCCTGCGTG CCGATATGGA GCGCTCAGCC TTGCCCCATG CGGCCAGCGA GGTGAGCCCG
TGGGTGACCT TGAGCATCGG TGTGGCGGCT ATCGTCCCCG ATCGTGAGGC GTTGTCGGCG
ACGCTCGTTG CCAAGGCCGA CAGGGCCTTG TACAAGGCCA AGGGGAGCGG CCGTAACGTG
GTTCGCGCCG GTGGCGATGA ACATTGA
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| Protein sequence | MAMMSSRKPA NQSQELSFAV NLMEHLVVPT FVVDAACRVL IWNRACERLT GVMASEVVGT
VDHWQAFYDE PRLCLADALA KGMTADLDRL YSYHTEPSEH GHGMKAENWC VMPKMGERLY
LAIDAGPIYA DDGQLVAVVE TLRDMTDYKN AQMALQQQAT MDGLTGLANR RSFDEKLHVE
WSRSQRYGEP IALILADVDY FKRYNDCYGH QGGDECLKAV AGILRREVFR PTDMAARYGG
EEFAIILPGT DLQGALTVAE RLRADMERSA LPHAASEVSP WVTLSIGVAA IVPDREALSA
TLVAKADRAL YKAKGSGRNV VRAGGDEH
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