Gene Daro_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3761 
Symbol 
ID3568426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4044281 
End bp4047424 
Gene Length3144 bp 
Protein Length1047 aa 
Translation table11 
GC content62% 
IMG OID637682236 
Productacriflavin resistance protein 
Protein accessionYP_286960 
Protein GI71909373 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.29513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACC GTTTCAATCT TTCCGACTGG ACGCTGCACC ACCGGACACT GGTCGGCTAT 
TTCCTGTTTG CCATCGCCCT GATGGGGGTT ATCGCCTACG GCCGGCTGAG CCAGGCCGAA
GACCCGCCCT TCACCTTCAA GCTGATGGTG ATCCGCACCT TCTGGCCTGG CGCCACGGCC
CGCCAGGTCG AGCAGCAACT GACCGACAAG ATCGAGAAAA AGCTGCAGGA AACCCCTTAT
ATCGATCGGG TTTCCAGCTA CTCGCGCCCC GGCGAATCGA CCGTCATGTT CTTCGCCAAG
GACAGCACGC CACCGCCGAC GGTGCCTGAT GTTTTCTACC AGGTTCGCAA GAAGATCGGC
GATATCCGCC AGACCTTGCC CGCCGGCATC CAGGGCCCGT ACTTCAACGA CGAGTTTGGC
GACGTTTTCG GCAATATTTA TGCGCTGACT GCTGAAGGTT TCGACTACCC GCAACTAAAG
GACCTCGCCG AGCGTATTCG CGACGACCTG CTGCGCGTCC CCAATGTCGG CAAGGTGGAA
ATCTTCGGCA TCCAGGACGA AAGAATCTAT ATCGAGCTCT CCAACGCCAA GCTGGCGACG
CTCGGCATTG ACCAGACGAC CATCGTTCAG GCGCTCGCTC AGCAAAACAC GGTCGCCGGC
GCCGGCTTCT TCGAGACACA GAGCGAGCGC ATCCAGATCC GCCCCGGTGG CGCCTTCGAT
AGTGTTCAGG CGGTGGCCGA CACCTTGATC CGCGCTGGCA ATCGCAGCTT CCGGCTGGGC
GACATCGCCA CGGTTCGCCG CGGCACGATC GATCCGCCGG CGACGCAAGT TCGCTTCGGG
GGCAAACAGG CCCTGGCCAT CGCCGTTTCA ATGACCAAGG GTGGCGACGT GATCCAGTTG
GGCAAGGATC TGCAGAACCG TATCGCCGCG CTGCAAGCAT CCCTCCCGGT CGGCGTCGAG
ATCGGCGAGT CAGCCAGCCA GCCGGAAGCG GTCAAGCGTT CAGTCAAGGC TTTCGTCCAG
GCCCTGGCCG AGGCCGTCGC GGTCGTCATG CTGGTTACTT TCATCAGCCT TGGCATACGC
ACCGGCATGG TCGTCGCCAT CTCCATTCCA CTGGTCCTGG CCGCCACCTT CCTCGCCATG
CAGTTTTTCA ATGTCGGCCT GCACAAGGTT TCGCTCGGCG CACTGGTTCT GGCGCTCGGT
CTGCTGGTAG ATGACGCGAT CATTGCCGTC GAAATGATGT GGGTGAAAAT GGAACAGGGC
TGGGAACGCA CCCGCGCTGC CTCTTTCGCC TACACCAGCA CGGCCGGCCC CATGCTGTCC
GGCACGCTGG TCACGGTGGC CGGCTTCATC CCCATCGCGC TGGCCAAATC GGCGACTGGC
GAATACGCCT TTGCCTTCTT CCAGATCAAT GCGGTCGCCC TGCTTATCTC CTGGCTGGCC
GCCGTCATCG CCATTCCCTG GCTGGGCTAC AAACTACTGC CCGATCCACA CGCGACCCGC
CGGGCCAGCC GTTTCGAACA GAACTGGCCC CGCCTCGCCC GTTTGGGCGA CAAGATCGGC
CTGAACGGTC CGGGACATGC CGAAGATCAC GACGTCTATG GCACGCCCTT CTACCTCCGT
TTCAGGCAAC TGGTCAGCTG GTGTGTCGAG CGTCGCTGGC TGGTGATCGG CATCACCATC
GCGCTGTTCG CCCTGTCCAT CGTCGGCATG GGCAAGGTCC AGAAGCAGTT TTTCCCGAAC
TCGACACGCC TCGAACTCAA TGTCGAACTG CGCCTGCCCG AGGGTGCCTC GATCACCGCC
ATCGACGCCG AGACGAAGCG CCTGGAAGAC TGGCTGGACA AGGACAACGC TGAATTCGGG
CAGTTCGAGC ACTACATCAC CTACGTCGGT TCCGGCTCGC CGCGCTATTA CCTCGGCCTG
GACCAGCAAC TGCCGGCCAG CAATATCAGC CAGCTGGTCA TCGTAACCCG CAGCGTCGAG
GCCCGCGAGG CACTGCGCGG CCGGCTGATC AGCTTGTTCG AGCATGACGG ATTCGGCGCC
CGCGGCAACA TCAGCCGTAT CGAAAACGGA CCACCGGTCG GCTACCCGGT GCAATACCGG
GTGTCCGGCG AAGACATCAT GACCTTGCGC AAGGCCGCAG CGCAGATCGC TGAAGTCATG
CGCAAGAACC CCGAACTGTC CAACGTGAAT ATGGACTGGA GCGAACTATC AAAGTCCGTC
GAGATTGAAA TCGACCAGGA CAAGGCCCGC CTGCTCGGCG TTTCCAGCCA GGATGTCGCT
GCCCTGCTCA ACATGTCGCT GACCGGCTAT ACGGTGACCA GTTTCCGCGA GGGCGAAAAG
ACCATCGACG TCGTCCTGCG CGGCGACCGC GACGAACGCA GCCACCTGTC GGCACTGGCC
GATCTTGCCG TACCGACCCG CGCTGGCAAG AGCGTGCCGC TGAGCCAGGT CGGCCACGTG
AAATATGGCT TCGAACCGGG ACTGATCTGG CGACGCGACC GCCTGCCGAC GATCACGGTA
CGCGGCAACC TTTACGGCAA GATTCAGCCA GCCACCGTCG TTGACCGCAT CAAGCCGGAA
ATAGAGGCTA TCCAGGCCGG CCTGCCTGAA GGCTACCGGA TCGCCACCGG CGGCTCGGTC
GAGGAATCGG CCAAGGGCTC CAGTTCCGTC ATTGCCGGTC TTCCGCTGTT CATCCTGGCG
GTCATCACCA TCCTGATGAT CCAGCTGCAA AGCATCTCGC GCGTCGTGAT GGTGCTGCTG
ACCGCACCAC TGGGCATTAT CGGCATCGCC CTGTTCCTGC TCGTCTTCAA TCAGCCCTTC
GGCTTCATGG CCCTGCTCGG CACCATTGCC CTATTCGGCA TGATCATGCG CAATGCCGTG
ATTCTGGTCG ATCAGATCGA ACAGGACATG GCTGCCGGCA AGGCGCGGCG GGATGCGATC
GTCGAATCGA CAGTCCGGCG TTTCCGGCCC ATCGTGCTGA CTGCCGCCGC CGCGGTGCTG
GCGATGATCC CGCTCTCCAG AAACGACTTC TTCGGACCGA TGGCGGTCGC CATCATGGGC
GGACTGATCG TCGCCACCGG GCTGACCCTG CTCTTCCTGC CATCGCTTTA TGCTGCATGG
TACAAGGTAA AAAGCAGTAG CTAA
 
Protein sequence
MSHRFNLSDW TLHHRTLVGY FLFAIALMGV IAYGRLSQAE DPPFTFKLMV IRTFWPGATA 
RQVEQQLTDK IEKKLQETPY IDRVSSYSRP GESTVMFFAK DSTPPPTVPD VFYQVRKKIG
DIRQTLPAGI QGPYFNDEFG DVFGNIYALT AEGFDYPQLK DLAERIRDDL LRVPNVGKVE
IFGIQDERIY IELSNAKLAT LGIDQTTIVQ ALAQQNTVAG AGFFETQSER IQIRPGGAFD
SVQAVADTLI RAGNRSFRLG DIATVRRGTI DPPATQVRFG GKQALAIAVS MTKGGDVIQL
GKDLQNRIAA LQASLPVGVE IGESASQPEA VKRSVKAFVQ ALAEAVAVVM LVTFISLGIR
TGMVVAISIP LVLAATFLAM QFFNVGLHKV SLGALVLALG LLVDDAIIAV EMMWVKMEQG
WERTRAASFA YTSTAGPMLS GTLVTVAGFI PIALAKSATG EYAFAFFQIN AVALLISWLA
AVIAIPWLGY KLLPDPHATR RASRFEQNWP RLARLGDKIG LNGPGHAEDH DVYGTPFYLR
FRQLVSWCVE RRWLVIGITI ALFALSIVGM GKVQKQFFPN STRLELNVEL RLPEGASITA
IDAETKRLED WLDKDNAEFG QFEHYITYVG SGSPRYYLGL DQQLPASNIS QLVIVTRSVE
AREALRGRLI SLFEHDGFGA RGNISRIENG PPVGYPVQYR VSGEDIMTLR KAAAQIAEVM
RKNPELSNVN MDWSELSKSV EIEIDQDKAR LLGVSSQDVA ALLNMSLTGY TVTSFREGEK
TIDVVLRGDR DERSHLSALA DLAVPTRAGK SVPLSQVGHV KYGFEPGLIW RRDRLPTITV
RGNLYGKIQP ATVVDRIKPE IEAIQAGLPE GYRIATGGSV EESAKGSSSV IAGLPLFILA
VITILMIQLQ SISRVVMVLL TAPLGIIGIA LFLLVFNQPF GFMALLGTIA LFGMIMRNAV
ILVDQIEQDM AAGKARRDAI VESTVRRFRP IVLTAAAAVL AMIPLSRNDF FGPMAVAIMG
GLIVATGLTL LFLPSLYAAW YKVKSSS