| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3760 |
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| Symbol | |
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| ID | 3568425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4043189 |
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| End bp | 4044277 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637682235 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_286959 |
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| Protein GI | 71909372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 73 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.196565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA CCATGCCTCG TTCACTCGCC CTGCTACTCG GTGCCTGCGC GCTCCTTGCC
GGCTGCCATG CCGGCGACCC ACCGCCGCCG GCACCACGCA CCGTATTGGT GCATGAGGCC
AGCAGCGCGC CGTTGAGCAG TGGCATCTAC ACTGGCGAGA TTCGCGCCCG CCACGAAGTT
GACCTCGCTT TTCGCGTCGG CGGCAAGATT GCCACCCGTC TGGTCGACGC CGGGGCCGAA
ATCAAGGCCG GCCAAGCCCT CGCCCGCCTC GACCCCAACG ACCTGCAACT GGCTGCCGCC
GCTTCCCGGG CACAATTGGC CGCCGCCGAA AGCGACCTGA CGACCACCCG CGCCGACCGT
GACCGCTACG CCGGCCTGCT GGCCAAAAAG TTCGTCAGCC AGGGCGCGTT CGATGCCAAG
GACAACGCCT TCAACAGCGC CCAGGCTCGC CTGGAACAGG CCCGAGCCCA AAACCAGATC
AGCGGCAACC AGGCCGCCTA CGGCACGCTG AGCAGTGAAT TTCCAGCCAT CGTCACCGCT
GTACTGGCCG ATACCGGACA AGTCGTCAGC CCTGGCCAGG CCGTGCTGCG CGTTGCCCGC
CCCGAGGAAA AGGAAGTGGC CATCGCCATT CCCGAAAACC GGCTGGCCGA GCTCAAGGCA
GCAAAAGGTC TTCAGGTCAC CCTGTGGGCC GATCAGAACA TCAAGCTGCG CGGCGAACTG
CGCGAGCTTT CTCCGGCCGC CGACCCGGCA ACCCGCACCT ACGCGGCCCG CATCCGGCTA
CTCAACCCGT CACCCGAAGT CCGTCTCGGC ATGACCGCTC GCGTCATGGT GAACAACAAC
GCCGATAGCA ACCTGCTGGT ACCACTCAGC GCGGTCATCG ACCTCGGACA GGGACCGCTG
GTCCGGGTCG TCAGCAACGG CAAGGTCACC ACCCGGCCGG TGCAGATTGC CCAATTCCGC
GAGGATGGCG TCGCCATTAC TGCCGGACTG CAGGCCGGCG AACTGGTCAT CATCAGCGGC
GCCGGCAAGC TGGTTGACGG CCAGGACGTC CAGCCGAAAC CATCCACCCC GCCGGCCAGG
CAGCGTTAA
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| Protein sequence | MPKTMPRSLA LLLGACALLA GCHAGDPPPP APRTVLVHEA SSAPLSSGIY TGEIRARHEV
DLAFRVGGKI ATRLVDAGAE IKAGQALARL DPNDLQLAAA ASRAQLAAAE SDLTTTRADR
DRYAGLLAKK FVSQGAFDAK DNAFNSAQAR LEQARAQNQI SGNQAAYGTL SSEFPAIVTA
VLADTGQVVS PGQAVLRVAR PEEKEVAIAI PENRLAELKA AKGLQVTLWA DQNIKLRGEL
RELSPAADPA TRTYAARIRL LNPSPEVRLG MTARVMVNNN ADSNLLVPLS AVIDLGQGPL
VRVVSNGKVT TRPVQIAQFR EDGVAITAGL QAGELVIISG AGKLVDGQDV QPKPSTPPAR
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