| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3754 |
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| Symbol | |
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| ID | 3568419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4036033 |
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| End bp | 4037718 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637682229 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_286953 |
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| Protein GI | 71909366 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.943588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACTA TCTCGGATAA CGACGGGTTC ATCGACTATG CCGCCTTCGG GGTCAGCCCG
GAGGATTTGC GCTCGCTGTG CGCCTTGTCC GACGTGTGGC GTAACGCAAT ACGCAAGGTG
GCCGGATGTT TGGGGGCGAA TGCCTCACTT GATGAGTTTG TCGGGCGGAC GCTCGAGTTA
CCGTTGATGA TTGCCGATAT CGCCTGGCAG CGGCAATGGA TGCAGTCATG GCACAAGCTG
AGTAGCCGTG GCTTTGCAAT GGTCGAAATG TTCGGTTTCT TTAACCGTGC AATCGCCTGC
GCCGAGACAG ACCTGTTCGG TGAGATGGCG CAGGTTAGCC GGGTTCAACT GGATTTGTTC
GGCATTCTCC GACGCTGTGT CGTTGCAGCG ATCAGTTGCG CCATTGAGCT GGGAGAAGAG
GCGCATAACT CCGAACAGGG TTTGCCCGGT GAGTTTGCCG CGATGCGCAA TTTGCGCCAG
ATTTCGGAAA ATGCTCGGGC CGCTGCCGTG CTGTCGGTTT CCATGGTCAA TCGTCGGGCT
TTCTCCCACC TGACGGCGAG CGAATTGCAG AGTTTGCCGG TGTTGCTGAC CGATCAGTTG
ACCACCCTGT TGCGTCCTCA GGACAAGGCG TTCATCGGTC ACGAGGGCGA ATGGCTTCTG
GTGTTGCCGG ATGTGCATTC CGCCGCCCAG CCAGCCTTGG CCGCTGCCCA GATTCGCCGT
GCCTTTGGGC ATCCTTTGGT ATTGCTCAGC GGTCGTGGCA TCTCGCTGGA TGTGGCGATT
GGTGCGGCCA TGTCTCCCGA GCATGGCAGC GATGCCGAAG AATTGATCCA GGCAGCCAGG
CTGGCGCGAG CCAGCCTGCA ATCCTCCAAT GAACCCTTCG CCATGTACGA TCTGCGCATG
AAGGAGGATT GGCAGAGCCA CCATCAACTG TCGGAGGAAC TCCGGGAGGC ATTGCGCAAG
GACGTGCTGA GCCTTCACCT GCAGCCGCAG GTGGATGTTG AAAGCGACCG GTGTTTTGGT
GCCGAGCTTC TGCTGCGCTG GCAGCGGAGC AACGGAGATT GGGTGGCGCC GTCGTTGGTC
GTGGAAATGA TCGAAGAATA CGGGTGGCGC GCTCAATTTA CCGAGTGGCT GATCCGTTCG
GCCCTGCGCC TCAGCGCGGA GCTTGACGCC GCGGGCGTCG ATATCCGCTT GTCGCTCAAC
CTGACGGCCG GCGATTTGCT CGATACCGAT CTGCCTGAAC TGGTGGCCCA ATGTCTGGAA
ACCTGGCGTC TGCCTGCCGA GCGATTCACC TTTGAGTTGA CCGAGTCGGT GATGATGGTC
GACCGCGAGC GCGGTCTGTC GGTGATGTCC AAGTTACGTG CCATGGGGGT CAAGCTGGCT
CTGGACGATT TCGGTACCGG CTATTCTTCA TTGAGCTACC TGGTCACGCT GCCCTTGAAC
GAGATCAAGA TCGACCGTTC CTTCGTGGTT GGCATGTTCT CGTCGATCGA AGATCTGCGT
ATTGTGCGGA CGATTATCGA TTTGACCCAT GATCTTGGTA TGGTTTCGCT GGCCGAGGGG
GTCGAGGAGG CCATTCAGCG CGATCAGTTG TTGGCGCTCG GGTGCACTAA GGTTCAAGGT
TATTTCTACG GGAAACCAAT GCCGTTCGCT GACTTCGTTG CCTGGCATCG AGCCCGTCAG
GCTTGA
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| Protein sequence | MTTISDNDGF IDYAAFGVSP EDLRSLCALS DVWRNAIRKV AGCLGANASL DEFVGRTLEL
PLMIADIAWQ RQWMQSWHKL SSRGFAMVEM FGFFNRAIAC AETDLFGEMA QVSRVQLDLF
GILRRCVVAA ISCAIELGEE AHNSEQGLPG EFAAMRNLRQ ISENARAAAV LSVSMVNRRA
FSHLTASELQ SLPVLLTDQL TTLLRPQDKA FIGHEGEWLL VLPDVHSAAQ PALAAAQIRR
AFGHPLVLLS GRGISLDVAI GAAMSPEHGS DAEELIQAAR LARASLQSSN EPFAMYDLRM
KEDWQSHHQL SEELREALRK DVLSLHLQPQ VDVESDRCFG AELLLRWQRS NGDWVAPSLV
VEMIEEYGWR AQFTEWLIRS ALRLSAELDA AGVDIRLSLN LTAGDLLDTD LPELVAQCLE
TWRLPAERFT FELTESVMMV DRERGLSVMS KLRAMGVKLA LDDFGTGYSS LSYLVTLPLN
EIKIDRSFVV GMFSSIEDLR IVRTIIDLTH DLGMVSLAEG VEEAIQRDQL LALGCTKVQG
YFYGKPMPFA DFVAWHRARQ A
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