| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3748 |
|---|
| Symbol | |
|---|
| ID | 3568413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 4028242 |
|---|
| End bp | 4029696 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637682223 |
|---|
| Product | succinate semialdehyde dehydrogenase |
|---|
| Protein accession | YP_286947 |
|---|
| Protein GI | 71909360 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAC AGAACACTGA ATTGCTACGG TCAACCAACC TGATTGGCGG AATATGGGCC
AGGGCCGATG ACGGCGCCCA GCTGGCGGTG ATCAACCCGG CGACCGGGGA AAAGCTGGCC
GATGTACCGC TCTGCGGCGC CACCGAAACC CGCCGCGCCA TCGACGCAGC CAATGCCGCC
TGGCCGGCTT GGCGTGCCCT GACCGCACGT CGCCGTTCCC AATTGTTGCA AGCCTGGTTC
AGCCTGATCA TCAAGAATGC CGACGACCTG GCCCAGCTGG TCACAGCCGA ATGCGGCAAG
CCGTTGCAGG AAGCCAAGGG CGAGGTGATC TACGGCGCCT CCTTTGTCGA GTGGTTTGCC
GAAGAGGGCA AGCGCACCTA CGGCGAGAGC ATCCCGAGCC CGGCTGCGAA CACGCGCCTG
CTGGTCATCA AGCAGCCGAT CGGCGTCTGT GCGGCAATCA CGCCCTGGAA TTTCCCGCTC
GCCATGATCA CCCGCAAGGT CGCTCCGGCA CTGGCCGCCG GTTGCCCAGT GGTGGTCAAG
CCGGCCGAAG CGACGCCGCT GACGGCTCTG GCCCTGGCCG TGCTGGCCGA ACAGGCAGGT
TTCCCGGCTG GCGTATTCAA TGTCGTCACT GGCAAGCCGG CTGAGATCGG CGGCGAGCTG
TGCGCCAACC CTATCGTGCG CAAGCTGTCC TTTACTGGCT CGACCGGCGT TGGGCGCCTG
CTGATGGCGC AATGCGCGCC GACCATCAAG AAGCTGTCGC TGGAATTGGG CGGCAATGCG
CCGTTCATCG TGTTCGATGA CGCCGATGTG AACGCTGCGG TCGACGGTGC CATTGCGGCC
AAATACCGCA ACACCGGCCA GACCTGCGTC TGCGCCAACC GATTCCTGAT CCAGGCTGGC
ATCTACGATG AGTTTGCCGC CAAGTTTGCC GAGAAGGCGA GCGCCCTGAA AGTCGGCGCC
GGCATTGAAG CCGACGTCGC GCAAGGCCCG CTGATCAACG CAGCCGGCCT GAGCAAGGTC
GAAGCACACG TCGCCGACGC AGTCGGCAAG GGCGCGCGCG TACTGTGCGG TGGCGCCCGC
CATGAACGCG GGGGTAACTT CTTCCAGCCA ACGGTGCTGG CCGACGTGAC GACCGCGATG
ATGGTGGCCC GTGAGGAAAC CTTCGGCCCG GTAGCACCGC TGTTCCGCTT CGAGACCGAG
GAACAGGCCA TCGCCATGGC CAACGATACC GAGTTCGGCC TGGCCGCCTA CTTCTTCACC
CGCAATGTCG GCCGCTGCTG GCGCGTCGGC GAGGCGCTGG AATACGGCAT GGTCGGCATC
AATACCGGCA TGATCTCCAA CGAGGTTTCG CCGTTCGGCG GCATCAAGCA ATCCGGCCTC
GGCCGCGAAG GCTCGAAGTA CGGCATCGAG GACTATCTGG AAATCAAATA CCTCTGTTTC
GACGTCAATA CCTGA
|
|---|
| Protein sequence | MNLQNTELLR STNLIGGIWA RADDGAQLAV INPATGEKLA DVPLCGATET RRAIDAANAA
WPAWRALTAR RRSQLLQAWF SLIIKNADDL AQLVTAECGK PLQEAKGEVI YGASFVEWFA
EEGKRTYGES IPSPAANTRL LVIKQPIGVC AAITPWNFPL AMITRKVAPA LAAGCPVVVK
PAEATPLTAL ALAVLAEQAG FPAGVFNVVT GKPAEIGGEL CANPIVRKLS FTGSTGVGRL
LMAQCAPTIK KLSLELGGNA PFIVFDDADV NAAVDGAIAA KYRNTGQTCV CANRFLIQAG
IYDEFAAKFA EKASALKVGA GIEADVAQGP LINAAGLSKV EAHVADAVGK GARVLCGGAR
HERGGNFFQP TVLADVTTAM MVAREETFGP VAPLFRFETE EQAIAMANDT EFGLAAYFFT
RNVGRCWRVG EALEYGMVGI NTGMISNEVS PFGGIKQSGL GREGSKYGIE DYLEIKYLCF
DVNT
|
|---|
| |