| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3743 |
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| Symbol | |
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| ID | 3567378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4020630 |
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| End bp | 4022798 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637682217 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_286942 |
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| Protein GI | 71909355 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.265049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA TTACTGCACT GTACGAGCTC GCGAGGATAC CCTCTGTTTC AACGCAGCAG
AATATCCTGG TCGTAGATGA CGAACCGCGC TTTCGGAGTG CCTACACTGC GCTGCTCGAC
AGCGATCAGC GTTCCATCGA CGAAGCCAGC ACGGGACAGG AAGCCATTGC CAAGCTAAAG
GCGGGGAAGA CCGATCTCGT CATTTTGGAC TTGCGACTTC CAGACATCTC CGGTCTGGAG
ATCATGGAAT GGATGAGCGC GCACGGGATC GATACCGATG TGATCGTGTT CAGTGCCGAC
AAGTCAATCG ATTCGGCGAT CCATGCGCTC CGTCATCGGG TCTTCGAGTT CTTGCGCAAG
GATTGCGATC CGGACGACAT GATCATCGCC GTCGAGCGAG CTTTGGTTCA TCGCCAGCGC
AAGAAAGAGC ACGCACTCAT TTCGGCGCAA ATGCAGCATT CTGAGCGCCT GCACCGCTTC
TTGGTCGAGC AGTCGCCAGA CATGATCTTT ACCCTGGATC CACAGGGGCG ATTCACCTTT
ATCAATGGTC GAGTGAACGC TTTGCTGGGC TATACCCCCG GCGAGTTAAC CGGACAGCAT
TACTCACAGG TGGTCGATTC CCGGGACTAC GAACACGTTC AATATGCCTT CATTGAAAGG
CGCGTCGGCG AACGAGCCAC CAGCAACCTT GAAGTGCGCT TCAGGCGCAA ACCGTCCTCC
CCCGCGTTAC GCAACGGTGC GGTGGTGACC AGCATCCTGA GTTCGCAGGG CGTATACGAA
ACCCAGCAAT TTGGGCAACC CAGTGCGTTC CTCGGGACAT CTGGCGTGGC GCGTGACATC
TCGGAACGCA AGAAGGCGGA AGAGACCATC ACATTTCAGG CGTTTCATGA TCTCCTGACC
AAGTTGCCCA ATCGAATCCT GTTCCTGGAT CGGCTGGAGA TGGCGATAGC CCAGGCATCA
CGGCGCGAAG AAAAACTGGC TGTGATGTTT CTGGATATCG ATCGTTTCAA ACTGGTCAAC
GACACCTACG GCCACCAGGT GGGGGACCAA CTTCTCCGGG AGTTTGCGGC CCGTGTCCGC
CGTTGTTTGC GGACAGGAGA TACCCTGGCC AGACAAGGTG GCGACGAATT TACTGCTTTG
CTGCCGACCC TGACGAACCG CGATGACGCG AATGTGGTTG CCGAGAAAAT TCTCTCGGAA
ACGCGCCGGC CATTCGTCGT GGCTGAAACT CAATTTCTGG CGACGACCAG TATCGGCATA
GCCATCTATC CCGATGATGG CACGAATGCT CAGGACTTGA TTCGCTGTGC TGACATGGCG
ATGTACCAAG TCAAGGCACA GGGCAAGAAT GGCTATGTGG TGTTTCAGGA ACACATGCAC
ACAGCGCATC TTGACCGTTT GTCCATCGAG AATGACCTGC GGAAAGCCCT GAAGGAAGGC
AACCAGTTTG AATTGCATTT CCAGCCACAA ATCGATGCGA CGGTCGGGCG TGCTGTTGGG
GTTGAGGCCC TGATTCGCTG GCACCATCCA CGAGAGGGCT TGATCAGCCC TGAAATCTTT
ATTCCTATTG CCGAAGAGAC GGGTCTGATC ATCGCGATCA GCGACTGGGT GCTGCGCGAA
GCTTGTGCGC AATTGGCGCA CCTGCGAGAA CAAGGCTTCG GGACGCTACG AATAGGCGTC
AATCTTTCGC CCCGCGAATT TGATCGAGCC GATCTGCTGG AGCGAATCCG CATTCCTCTC
GACGAATTCG GGATTTCGCC CGAGTCGCTT GAAATCGAAA TTACCGAAAG CCTGCTGATG
AAGGACGTAG AGAATATCGT CGCGCAGGTG AAACGCCTTC GCAGTACCGG GGTGCACGTC
TCAATCGATG ATTTCGGTAC GCGCTATTCC TCGCTCAATT ACCTTCGTCG CTTCTCGGTC
AACCGGATCA AGATCGACCA GTCATTTGTC CGCGACCTGC AGACCTCCCA AGATTCATAC
GCCATTATCC AGGCCATGGT CGGAATCGCC CGCAACTTCA ATCTCCATGT GATTGTGGAG
GGGGTTGAGA CCGAGCACCA AGTGGCTGTC CTGGGACAGT TGGGGTGTCA CGAGATGCAG
GGCTATTTCT TCAGTCGTCC GTTACCGGCT CGGCAGTTGG TAGAGTTTTT GAAGGGCTCG
AATCATTAG
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| Protein sequence | MNAITALYEL ARIPSVSTQQ NILVVDDEPR FRSAYTALLD SDQRSIDEAS TGQEAIAKLK
AGKTDLVILD LRLPDISGLE IMEWMSAHGI DTDVIVFSAD KSIDSAIHAL RHRVFEFLRK
DCDPDDMIIA VERALVHRQR KKEHALISAQ MQHSERLHRF LVEQSPDMIF TLDPQGRFTF
INGRVNALLG YTPGELTGQH YSQVVDSRDY EHVQYAFIER RVGERATSNL EVRFRRKPSS
PALRNGAVVT SILSSQGVYE TQQFGQPSAF LGTSGVARDI SERKKAEETI TFQAFHDLLT
KLPNRILFLD RLEMAIAQAS RREEKLAVMF LDIDRFKLVN DTYGHQVGDQ LLREFAARVR
RCLRTGDTLA RQGGDEFTAL LPTLTNRDDA NVVAEKILSE TRRPFVVAET QFLATTSIGI
AIYPDDGTNA QDLIRCADMA MYQVKAQGKN GYVVFQEHMH TAHLDRLSIE NDLRKALKEG
NQFELHFQPQ IDATVGRAVG VEALIRWHHP REGLISPEIF IPIAEETGLI IAISDWVLRE
ACAQLAHLRE QGFGTLRIGV NLSPREFDRA DLLERIRIPL DEFGISPESL EIEITESLLM
KDVENIVAQV KRLRSTGVHV SIDDFGTRYS SLNYLRRFSV NRIKIDQSFV RDLQTSQDSY
AIIQAMVGIA RNFNLHVIVE GVETEHQVAV LGQLGCHEMQ GYFFSRPLPA RQLVEFLKGS
NH
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