| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3737 |
|---|
| Symbol | |
|---|
| ID | 3567372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 4016582 |
|---|
| End bp | 4017691 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637682211 |
|---|
| Product | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein |
|---|
| Protein accession | YP_286936 |
|---|
| Protein GI | 71909349 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 0.983513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.19888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCCC ATCCCGCCAT AGCCAGCACT GCTGAAATCG TCACCGAACT CAAGGCCGGC
CGCATGGTCA TCCTGGTCGA TGAAGAAGAC CGCGAAAACG AGGGCGACCT CGTCATGGCC
GCCGAGCACA TCACGCCTGA AGCCATCAAT TTCATGGCCA AGTTCGGCCG TGGCCTGGTC
TGCCTGACCC TGACCGAAGC ACGCTGCAAA AAGCTGGGGC TGACCCAGAT GGCGCGCAAC
AACGGTACGG TTTACGGCAC CGCCTTCACC GTTTCCATCG AAGCTGCCGA GGGCGTCACC
ACCGGCATCT CCGCCGCTGA CCGGGCGCGC ACCATCCAGG TCGCCGTCAA CAAGGCATCG
ACGGCTGACG ACATCGTGCA GCCCGGCCAC GTCTTCCCGA TCACCGCCCG CGAAGGTGGT
GTGCTGGTCC GCGCCGGCCA TACCGAAGCC GGCTGCGACC TCGCTGGCAT GGCCGGCCTG
GAGCCATCCT CCGTTATCTG CGAGATCATG AACGACGACG GCACGATGGC CCGTTTGCCG
GAACTGATCG AATTCGCCAA GGAACATGGC CTGAAAATCG GCACCATCGC CGACCTGATC
CATTACCGTG CCTCCTCGGA AACCCTGGTC GAGCGCGTCA CCAGCAAAAC CGTCTCCACG
GCCCACGGCG ATTTCACCCT GCACGCTTAC GTCGATCGGG CCAGCGGCGC CACGCACCTC
GCCATGGTTA AAGGCAGCCT CCCGGCCGGC GGCGAAACCC TGGTTCGCGT CCATGAGCCC
TTATCTGTCC TCGACTTCCT TGATCCGGCC AGCAAACGCC AGGCGTTCTC GATCGACCAG
GCGCAGGCTG CGCTGGCCAA GCACGGCCAC GGCGTCATCG TCCTGATGCA TCGCCCGGAA
GATGGCGCGG CGCTGCTTTC CCGCCTGACC GGCACCGCCC CGACCGCCCC CGCCAAGTGG
GACCCGCGCA GCTACGGCAT CGGCGCCCAG ATTCTGCGTG ACCTCGGCGT GACCAAGATG
CGTCTGCTCT CCAGCCCGCG CAAGATGCCT TCCATGACCG GCTTCGAACT TGAAGTCACC
GGTTTCGTCA CCTCTCCTGC GGAGCTCTAA
|
|---|
| Protein sequence | MPPHPAIAST AEIVTELKAG RMVILVDEED RENEGDLVMA AEHITPEAIN FMAKFGRGLV
CLTLTEARCK KLGLTQMARN NGTVYGTAFT VSIEAAEGVT TGISAADRAR TIQVAVNKAS
TADDIVQPGH VFPITAREGG VLVRAGHTEA GCDLAGMAGL EPSSVICEIM NDDGTMARLP
ELIEFAKEHG LKIGTIADLI HYRASSETLV ERVTSKTVST AHGDFTLHAY VDRASGATHL
AMVKGSLPAG GETLVRVHEP LSVLDFLDPA SKRQAFSIDQ AQAALAKHGH GVIVLMHRPE
DGAALLSRLT GTAPTAPAKW DPRSYGIGAQ ILRDLGVTKM RLLSSPRKMP SMTGFELEVT
GFVTSPAEL
|
|---|
| |