| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3711 |
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| Symbol | |
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| ID | 3568144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3987410 |
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| End bp | 3988774 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637682184 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_286910 |
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| Protein GI | 71909323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.131853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCGC TGCGCATCAA CCTAGAACAA GAAGATATTC CAACGCACTG GTATAACATC
GTTGCCGACA TGACCAACCC GCCGGCGCCG CCACTTGGGC CGGATGGCAA TCCGGTGCCG
CCGGAAGCAA TGGGGGCGAT TTTTCCGGGG CCGATCCTCG AGCAGGAAAT GTCGGCCGAA
CGCTGGATCG CCATCCCCGA AGAGGTCCGC CAGATCTACG CCCTGTGGCG TCCAGCGCCG
CTCTGCCGCG CCTTGCGCCT TGAGCAGGCA TTGGGTACCC CGGCCAAGAT TTTCTACAAG
TACGAGGGCG TTTCGCCGGC CGGTTCGCAC AAACCGAACT CTGCCGTGCC GCAGGCCTAT
TTCAACAAGA TTGCCGGCAC CAAGCGGCTG ACCACCGAAA CCGGCGCCGG CCAGTGGGGT
TCGTCGATTG CCTTCGCTGG CCAGATGTTC GGCCTGCCGG TGCGCGTCTT CATGGTCAAG
GTCAGCTACG AGCAGAAGCC TTTCCGCCGC TCGATGATGC AGACCTGGGG CGCCGAAGTC
TTCGCCAGTC CGACCAATCT GACCAACGCC GGCCGCGCTG CGCTGGCCGC CGATCCCGAC
AATCAGGGCT CGCTCGGCCT GGCCATTTCG GAAGCTGTCG AAGAAGCGGC GGCCGACCCC
GGCACCTGCT ACACGCTTGG TTCCGTGCTC AACCACGTGC TGCTGCACCA GTCGGTCATC
GGCCTCGAGG CCAAGAAGCA GTTCGACAAG ATCGGCCTTT ATCCGGATGT GATCTTCGGC
CCCTGTGGCG GTGGTTCCAG CTTTGGCGGG ATCGCTTTCC CCTTCCTGGC CGACAAGGCA
GCCGGCGACA AGCGCGCTGC CAACCTGCGC TGTGTCGCGG TCGAGCCGAC CTCCTGTCCG
ACCCTGACCA AGGGCCACTA TGCCTACGAC TACGGCGACG TTTCCGGCTA TACGCCAATC
ATGAAAATGT ACACGCTCGG CCACGACTTC ATGCCGCCCG GCATCCATGC CGGTGGTCTG
CGCTACCACG GCGATTCGCC GCTCGTCTCG CAACTGCTCC ACGAGGGGCA GGTCGAGGCG
CTGGCCGTGC CACAGGTGGC GACTTTTGAA GCCGGCGTCC AGTTTGCCCG GGCCGAAGGC
ATCATCCCGG CGCCGGAGTC CTGCCACGCC ATCCGCGCCG CCATCGACGA GGCGCTGAAG
TGCAAGGTGA CGGGCGAGGC GAAGACCATC CTGTTCAGCC TGACCGGCCA CGGCCATTTC
GACATGGCTT CGTACGACAA GTTTTTCTCC GGGCAACTGG AAGATTACGA CTACCCGGCC
GAAGCGATTG CCGAGTCGTT GAAGCATTTG CCGAAAGTGG GCTGA
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| Protein sequence | MTPLRINLEQ EDIPTHWYNI VADMTNPPAP PLGPDGNPVP PEAMGAIFPG PILEQEMSAE
RWIAIPEEVR QIYALWRPAP LCRALRLEQA LGTPAKIFYK YEGVSPAGSH KPNSAVPQAY
FNKIAGTKRL TTETGAGQWG SSIAFAGQMF GLPVRVFMVK VSYEQKPFRR SMMQTWGAEV
FASPTNLTNA GRAALAADPD NQGSLGLAIS EAVEEAAADP GTCYTLGSVL NHVLLHQSVI
GLEAKKQFDK IGLYPDVIFG PCGGGSSFGG IAFPFLADKA AGDKRAANLR CVAVEPTSCP
TLTKGHYAYD YGDVSGYTPI MKMYTLGHDF MPPGIHAGGL RYHGDSPLVS QLLHEGQVEA
LAVPQVATFE AGVQFARAEG IIPAPESCHA IRAAIDEALK CKVTGEAKTI LFSLTGHGHF
DMASYDKFFS GQLEDYDYPA EAIAESLKHL PKVG
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