| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3706 |
|---|
| Symbol | |
|---|
| ID | 3567918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3984113 |
|---|
| End bp | 3985057 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637682179 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_286905 |
|---|
| Protein GI | 71909318 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase
[COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein
[TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.461385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA TCGTCGAAGT TGCCGCTGCC GTCATGCTGC GTGCCGATGG CCGCGAATTC
CTGCTCGCCC AGCGCCCGGA AGGCAAGGTT TACGCTGGCT ACTGGGAATT CCCCGGCGGC
AAGGTCGAAC CCGGCGAAAC CGTCCGCCAG GCACTGATCC GCGAACTGCA GGAGGAACTG
GGCATCACGG TCACCGCCTG CTCGCAGTGG CTGACCCGGC AATTTACCTA CCCGCATGCC
ACCGTCCGCC TGAACTTCTG GCGAGTCACC GCCTGGGATG GCGAGATCGG CATCACCGCA
CCGCTCGAAC ATTCGGCAGT CGAGTGGCAA AAAACAGGAG GGGCCGCCAG CGTCGCCCCC
ATCCTGCCGG CCAACGACCC GATCCTGAAA GCCCTGTCGT TGCCGACAAC GATGGCCATC
ACGATGGCTG AAAGCGAAGG CACCGAGCGC CAGCTGGAGC GCCTCGAAGA AGCCCTGAAT
GCCGGCCTGC GCCTGATCCA GATTCGCGAC AAAAGCCTGC CGCCAGCCCA GCGCCTGTGG
TTTGCCGAAA CCGTGCTGCA ACTGGCCCGC AGCCATGGCG CCACGGTTGT CATCAACGAC
GACGAAGCAC TGGCCAGACG CATCGGCGCC GATGGTGTCC ACCTGTCAGC GGCACGCTTG
GCCGCTTGCC AGCAACGCCC GGACTTCACC TGGGTGGGCG CCTCCTGCCA TAGCGCGGAG
GAAATCGTCC GGGCCGGCGA ACTTGGTCTG GATTACGCGC TGCTGGGTCC GGTAATGCCA
ACGCCAACCC ATCCTGAATC AACCGGGCTC GGCTGGACTG AATTCGAAGG GCGACTGGCC
GGCAATACGC TGCCGGTGTT TGCGCTGGGC GGCATGAAGC CGGGAATGCT GGCCGAGGCC
CAAGGCCACG GCGCCCACGG ATTGGCGCTT ATGCGCGGCT GGTAG
|
|---|
| Protein sequence | MTKIVEVAAA VMLRADGREF LLAQRPEGKV YAGYWEFPGG KVEPGETVRQ ALIRELQEEL
GITVTACSQW LTRQFTYPHA TVRLNFWRVT AWDGEIGITA PLEHSAVEWQ KTGGAASVAP
ILPANDPILK ALSLPTTMAI TMAESEGTER QLERLEEALN AGLRLIQIRD KSLPPAQRLW
FAETVLQLAR SHGATVVIND DEALARRIGA DGVHLSAARL AACQQRPDFT WVGASCHSAE
EIVRAGELGL DYALLGPVMP TPTHPESTGL GWTEFEGRLA GNTLPVFALG GMKPGMLAEA
QGHGAHGLAL MRGW
|
|---|
| |