| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3700 |
|---|
| Symbol | |
|---|
| ID | 3567912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3977853 |
|---|
| End bp | 3978815 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637682173 |
|---|
| Product | dehydrogenase, E1 component |
|---|
| Protein accession | YP_286899 |
|---|
| Protein GI | 71909312 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.853849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT TTCCAACCGC AGTCGATCCG CTCCGGCTGT ATGAACAGCT GCTGCTGATC
CGCGCCTACG AAAACGCCAT CGTCCGGGGC AGCACCGACG GGCGCATTCC CGGCACCTGT
ACCTCGGTCG GCCAAGAAGC CGCCGCCGTC GGCGCCATCA ATGCCCTTGA GGCCGACGAC
CTGATCCTGA CCAACCATCG CAGCGCCGGC CATCTGCTGG CGCGCGGCGC CGATCCCGGC
AGAATGCTGG CCGAAGTGAT GGGCCGTCGT GACGGCTACT GCAAAGGCCG GAGCGGATCG
CTGCACATCT CGGCCAAGGA ACTCGGCGTC GTGCTGACCA CCACCATCGT CGGCGGCGAA
CTCTCGCTCG CGCCCGGCGT CGCCCTCGCC CAGACAATGC AGGGCCGGCC CGGCATCGTC
GCCTGCTTCT TTGGCGACGG CGCCGCCTGC GAAGGCAGCT TCCACGAATC GCTCAATCTG
GCCGCCCTGT GGAACCTGCC GGTGCTCTAC ATCTGCGAGA ACAACCAGTG GCAGGCCTTC
GTCCATCGCC GCGAAGCGAT GAGCAGCGAA CACGTCTCCG ACTGGGGTGC CGGCTACGGC
ATCCCGGCGC GAACCGTCGA CGGCAACGAC GTCTTCGCCG TGCTCGAAGC CACCCGCGAA
GCCGCCACCC AGGTGCGCGA CACCCGCCGA CCGGTGCTGC TTGAAGTGCT GACCTACCGC
ACACGCGGCC ATTTCGAACC GGACGACCAG GGTTATGTCG ACAAGGCGGA ACTCGCCGCC
TGGCTGGCCC GCGACCCGAT TGCCCTCTGC CGAGATCGTC TGATCGCCGA CGGACATCTC
GATGTTGCCG CCGACGCCGA ACTTGCGGCC CGAGTCGAGG CGAGCATCGC CGCCGCAGTC
GCCTTTGCCG CTGCCTCCCC TTTCCCATCC ATCGAGGAAC TCACCCTCGA CGTCTACGCC
TGA
|
|---|
| Protein sequence | MNAFPTAVDP LRLYEQLLLI RAYENAIVRG STDGRIPGTC TSVGQEAAAV GAINALEADD
LILTNHRSAG HLLARGADPG RMLAEVMGRR DGYCKGRSGS LHISAKELGV VLTTTIVGGE
LSLAPGVALA QTMQGRPGIV ACFFGDGAAC EGSFHESLNL AALWNLPVLY ICENNQWQAF
VHRREAMSSE HVSDWGAGYG IPARTVDGND VFAVLEATRE AATQVRDTRR PVLLEVLTYR
TRGHFEPDDQ GYVDKAELAA WLARDPIALC RDRLIADGHL DVAADAELAA RVEASIAAAV
AFAAASPFPS IEELTLDVYA
|
|---|
| |