| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3688 |
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| Symbol | |
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| ID | 3566800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3963234 |
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| End bp | 3964865 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637682161 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_286887 |
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| Protein GI | 71909300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCG TCCCCCACTC CCTCATCGCG CTAGCGGAAA CCCTGGAGTT ACGCTGGCAA
AGCTATCGTG CAAGTGGAGA CTTCGATCAT TTCATCGAAT TCACCCTGTC GCTGAATGGC
CTGACCGAAC GCCTCGGGCA GCAAAACCTG CCCGGCCTGG CCCGCGCCTG CGAAGAGTTG
GAGAACCGGG CGCTGGCCCA GTTCAATGAC GGCGCAGCCC ATCCGGTCAC CAGTGAGAAC
GCCGACGGCA TCAGCCAGCA ACTGAACACG ATTCTGCGCG TCCTGCAACG CCATGAAACA
CCGGCCGTCA TTGCCAAGCG CCAGTCCGAC ACAGAGGAAG ACGAGCGCGA TCAATGGGTA
CGCCAGCGCA ATGTCCTGAT CATCTCCCGT CCGGATCACC CGTGGTCGGC GGCGCTGGTC
GAGCAGCTTT CGTTTTACGG CTTCAAGGCC CATACCGCGA GTTGGGACGA CACTCCACAG
ATGGATGAAG AGCCCCTGGC GGCCGTCTTT ATCCCCGACC GCGAAGACAG CCCATACCTG
CCCCCGGCCA TTGCCGCCAT CCAGCGGCTC AAGGCAGTTT TCGTCACCAG TTACTTCTAC
TGCCTTTCGG TGCCCTCCTC GCTGGAAGCC ATTGTCGGCC TGCAACGAGC CGGAGCGAAT
GTCTGCATTC CGGCCGAATT CAAGCTCAGC GACATCCTGT CCCGCATTCT CGACCTGGTC
GAAAGCCGCG AGCAGGAAAC CCATCGCGTG TTGATCGTCG AGGATTCGAA AACCGCTGTC
GCCCACATCC AGCGTGCCCT GGACAGGCAC GGCATTGATA GTCGCGCCAT CAACACACCG
CTGGCCCTGC TCCAGGTCAC CTCGGAATAC CGGCCACACG CCATCCTGAT GGACATGTAC
ATGCCCTTCT GCACCGGCGT CGAGGTCACC CGCGCCCTGC GCCAGATTCC CGAATACCAT
TCACTGCCGG TGATCTACCT CTCCGGCGAA ACCGACATCG CCCAGCAGGT CGAAGCCTTG
CGCCTGGGCG GCGACCAGTT CCTGACCAAG CCAGCCAACC CGATCATCCT CGGCTCGGTG
GTCAAGACGA AGATCGAGCG CTATCGCGAC ATGCTGCGCT CCGGGCGCCA CGACAGCCTG
ACCGGACTAC TCAACCATTC CGCCTCCAAG GAGCAACTGG AGCAGATGCT GCGCCGCACC
CTGCCAGCCG GGCATCTGTC GGTGGCCATG ATTGACATCG ACCGTTTCAA ATTGATCAAC
GACAACTACG GCCACCCGGT CGGTGACCAG GTCATCCGCA GCCTTGCCTG GCTATTGCGC
GGCCGTTTGC GCAACACCGA CCTGATCGGG CGCTACGGTG GCGAAGAATT CATTGTCGCC
CTGAACGGTG TCGAACTCGG CCAGGCCATC ACGCTACTCG ACCGCATTCG CCACGACTTC
TCGCAGCTCC CTCATGCCCA TAGCCGGGGT GCCGTGCGCG CCAGCTTCAG TTGTGGCGTG
GCCTCGGTAC CCAGTTACCT GACCGGCGGC TCGCTGATCG AGGCGGCTGA CGAAGCACTG
CTCCAGGCAA AACGGGAAGG TCGCAACCAG ATCATTGCGG CAGGCCGCAA AAGGCAGGAA
TTAAGCGTCT AA
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| Protein sequence | MQTVPHSLIA LAETLELRWQ SYRASGDFDH FIEFTLSLNG LTERLGQQNL PGLARACEEL
ENRALAQFND GAAHPVTSEN ADGISQQLNT ILRVLQRHET PAVIAKRQSD TEEDERDQWV
RQRNVLIISR PDHPWSAALV EQLSFYGFKA HTASWDDTPQ MDEEPLAAVF IPDREDSPYL
PPAIAAIQRL KAVFVTSYFY CLSVPSSLEA IVGLQRAGAN VCIPAEFKLS DILSRILDLV
ESREQETHRV LIVEDSKTAV AHIQRALDRH GIDSRAINTP LALLQVTSEY RPHAILMDMY
MPFCTGVEVT RALRQIPEYH SLPVIYLSGE TDIAQQVEAL RLGGDQFLTK PANPIILGSV
VKTKIERYRD MLRSGRHDSL TGLLNHSASK EQLEQMLRRT LPAGHLSVAM IDIDRFKLIN
DNYGHPVGDQ VIRSLAWLLR GRLRNTDLIG RYGGEEFIVA LNGVELGQAI TLLDRIRHDF
SQLPHAHSRG AVRASFSCGV ASVPSYLTGG SLIEAADEAL LQAKREGRNQ IIAAGRKRQE
LSV
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