Gene Daro_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3680 
Symbol 
ID3566792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3954965 
End bp3955990 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID637682153 
Producthistidine kinase internal region 
Protein accessionYP_286879 
Protein GI71909292 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTA TACGGCACTT TCCCGCAACC TACCCCTTGC CCGACTGGCG CAATTTTGGG 
GTGATGCTGC GTTTGCTGCT CGGCGTCAAT GCGCTGGCGG CATTGGCGGC ACTGGTGCAA
ACCCCCGAGA TCGACGGCTG GATGGGGCAG TACATCGGGT TGGCGGCAGT CGTCGAGCCC
TTGCTTCTGC TCTGCCTCGG ATTGCTGTCC TTGTCCCGCG ACATCCTGTG GCGTCTGCCG
CTGCGCGTCG GCCAGGCCTG CGTGCTTGCC CTTGCCGGTG CTGTTTCGGC GGTGTTTGTC
CTCTATGCGC GTTCCGTCGG TCTGGTCGAG GCAGGTGGTG CGCTGCGGGC CATGTTGCTG
GCGATGGCCA TGGCTGCCTT GTTGCTGACT TATTTCGAAC TTCGTTCGCG GGCCTTTTCG
CCGGTACAGG CCGAGGCGAG GCTGGCGGCG CTCAATGCCC GCATTCGGCC GCACTTTTTG
TTCAACTCGC TGAACGCGGT ATTGTCCTTG ATTCGGGCGC GACCAAAAGA GGCCGAAGCG
GCGCTTGAGT CTTTGTCAGA CCTGTTCCGG GCCGCCATGC GCGACCCTTG CGAACTGGTC
AGTCTGGCCG ACGAAATAGC GCTGGCTAAG CAGTATCTGG CGCTGGAAGA CCTCAGGTTG
GGCGAGCGCC TGGCGATCGA CTGGCAAATC GGGGAGGTTT CCATGGCGCT GCCGATTCCG
CCGCTGATGC TGCAGCCGCT GTTGGAAAAC GCTGTTTATC ATGGCATCGA GCCGTCTGCG
GCGGGCGGCA CTGTCCGCAT CGGCATCGAA CAGAAGGGCG ACGAGTTGTG GATCGCCATC
GCCAATCCAA CCGCTGGTCA GGCCCAGCAT GCCGCTGGCA ACCAGATGGC GGTGGCCAAT
ATCCGCGAAC GGCTGGCCCT GTATTACGAT CTTGAAGCCC GCCTGGAAAT CGAGGTCGGC
GACAACAGTT ATGAGGTTCG TATCATCCTG CCATGCCAAC GCCGCAAACT CCCGCCAACC
CGCTGA
 
Protein sequence
MTSIRHFPAT YPLPDWRNFG VMLRLLLGVN ALAALAALVQ TPEIDGWMGQ YIGLAAVVEP 
LLLLCLGLLS LSRDILWRLP LRVGQACVLA LAGAVSAVFV LYARSVGLVE AGGALRAMLL
AMAMAALLLT YFELRSRAFS PVQAEARLAA LNARIRPHFL FNSLNAVLSL IRARPKEAEA
ALESLSDLFR AAMRDPCELV SLADEIALAK QYLALEDLRL GERLAIDWQI GEVSMALPIP
PLMLQPLLEN AVYHGIEPSA AGGTVRIGIE QKGDELWIAI ANPTAGQAQH AAGNQMAVAN
IRERLALYYD LEARLEIEVG DNSYEVRIIL PCQRRKLPPT R