Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3659 |
Symbol | |
ID | 3567601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3931993 |
End bp | 3934542 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637682132 |
Product | organic solvent tolerance protein |
Protein accession | YP_286858 |
Protein GI | 71909271 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.880911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGTT TTTCCCGCCG CCCGCTTGCT GTTTTCGTCT GTTGTCTGTT TGCCGGAGTG CAGACCGGGC ACGCGGCGGC TGATATTGAG CGGGCGATGG TCCAAGGCGA AAGCACCGCC CCTGCTGCCG AGCGTTCTGT CGCCATGCAG CTGGCAGCAG TTAGTGAATT GCCGTTGAAT CTGCGAAAGG AACGCAAGTT CGATGTGCTG GGCAAGAAAA AGCAGCCAGC CGAACCAGTG GCGCCGATGC TTGCTCCAGA AAAGCCGATA GAACTGAAAA AGGATGACGC ATATCCGTTG TTCATCGTGG CTGATCAGAT TGAGGGGCAG GCTGACGAAC TTACCGAAGC AGAAGGTGAT GTCGAGCTGC GCAAGGTTGG CACGCTGATT TACGCCGATC GCCTGACTTA TCGGCCGCTT GAGGATGAAG TCGAGGCAAC AGGCTCAGTC CGCATGCTGC AGGATGGCGC CGAAATCAGC GGGCCACACA TGCGGATGAA GTTGGCCGAC CAGATCGGTT CGGCTGAGCA GGTGACCTAC CATATCGTCA AGGAAGTGCC GAGCCGCTTC TATGCGCCGC AGCAGACTGT CGTCACGGTT GCAAGCAGCA ACGCGACCAA CTCCGGCGCG CCGATGATGC TCAATGTGTC CAATAGCTAC GGCTTGCCAA CACAGTTGCC CCCGCCGCGT CCCTCTGAAG CGAACGGTTA CGCCGAGCGC GTCGAGTTCG AAGGCGAAAA CCAGATGACA CTGTTTTCGA ATACCTACTC AACCTGCAAG CCGGGGCAGG CCGACTGGTA CATGAAAAGT TCCGAGACGC ACCTTGATTA TGACCGCAGT GAAGGCACGG CCAGGAACGC GACACTGTGG TTTGGCGGTG TGCCTATCGT CTACACGCCG GTCGCCGGCT TCCCGCTGAG CACCCAGCGA CGTTCAGGTA TTTTGCATCC TCATTTCTCG GCATCGACTC GCAGCGGCCT GGATATTTCG GTGCCGTATT ACCTGAATCT GGCACCGAAC TATGATCTGA CGCTGGTTCC GCGCTATATG AGCAAGCGAG GGATGCAACT TGGCGCCGAT GCGCGCTATG TTGATTACTT CTACGAGGGG GAGGCGCGTT TCGAGTACCT GCCCAATGAC GAAATGCTGG GGCGCAGCCG CTACGGCTAC CGGTTTGAGC ATCGGCATAA CCTGGGGCAG GGCGTCTCCG CCGCGCTGAA CTGGAATGGC GTTTCCGACG ATCTCTATTG GCAGGATCTA TCATCGCGCT TGCTGCAAAC CTCGCAGGCG CAGTTGCCAC GACAGGTGTC GCTGGGCTAC TCGCCATCGC CATGGTTGCA GAGTAACTTG CAGGTCTTGC GCTATCAGAC GCTGCAGATA GACCCGAACA ATCCGGTGAC CAGGCCCTAT TTCCTTGAGC CGCAACTGAA CCTGGTTGGC TACAAGCCGA ATATCTGGAA GACCGATTTC AGCATGGTCG GGCAATTCTC GCGCTTCACG CATGTCGATG CCGGCAAGGT GCAGGGCGAT CGAATGGTGT TCTACCCGCA GCTTTCCCTG CCCATCGTCC ATCCGGCTTT CCAGATTACC CCCAAGATTG GCCTGCACAT GACCAAGTAC ACGCTCGATC AGCAGGCTGC CGGTCTGCCG GAGAGTATCT CGCGTGTCTT GCCGACCTTT TCGCTGGATT CGACCGTAAT TCTGGAGCGC GAGGGCGACT GGTTCGGCCG TGGCTATATC CAGACGCTGG AACCGCGTCT GTACTACGTC AATATTCCGT ACAAGGATCA AAGCCAGATT CCCTTGTTCG ACTCTGGTCT GTCCGACTTC AATTTCGCCC AGATCTTTTC CGAGAACCGC TACAGCGGCT ACGACCGGAT CAACGATGCC AACCAGTTGA CCGCTGCGCT CACCACGCGT CTGCTCGATG GCGAGACTGG TGTTGAGCGT CTCAAGGCCA TGGTTGGCCA GCGCTATTAT TTCAAGCCGC AGCGCGTTGC AATTACCGGC GAAACGACCC GCCAGAACGA TTTTTCGAAT CTGGTCGCCG CAGTCAATGG GCTGGTGGCC CCCAAAACCT ATGCCGATGT GGCTTGGGAA TACAACTACC GTGAGAATAT CAGCGAGCGT TTCTCGGCCG GGGTGCGTTT CCAGCCGGAA CTCGGCAAGG TGATGTCGGC CAGTTATCGC TACACGCGTG ACCCGCTGAC CACCCTGTCG ACGGTCGATC AGGTCGATAT TGCCGGCCAG TGGCCGATTT CGGCAAATTG GTATGCGGTC GGCCGCTACA ATTATTCTCT GCGCGACAAG CGTGTACTTG AATCGATTGC CGGCGTGGAG TACAACGCCG GTTGCTGGGC GGTCCGCCTC GTTGGCCAAC ATCTTGGGGC CATTTCCGGT GCGGCGAACG ACACGGTGTT TTTCCAGCTT GAACTGAACG ACTTCGGCAG CATCGGCTCA AATCCGATCG GCCTGCTACG ACGCAGCATT CCCGGCTACG GCAAGATCAA CGAATTGCCC ACCAGCAGCA GCCTGCTTAC CTCCCAATGA
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Protein sequence | MPGFSRRPLA VFVCCLFAGV QTGHAAADIE RAMVQGESTA PAAERSVAMQ LAAVSELPLN LRKERKFDVL GKKKQPAEPV APMLAPEKPI ELKKDDAYPL FIVADQIEGQ ADELTEAEGD VELRKVGTLI YADRLTYRPL EDEVEATGSV RMLQDGAEIS GPHMRMKLAD QIGSAEQVTY HIVKEVPSRF YAPQQTVVTV ASSNATNSGA PMMLNVSNSY GLPTQLPPPR PSEANGYAER VEFEGENQMT LFSNTYSTCK PGQADWYMKS SETHLDYDRS EGTARNATLW FGGVPIVYTP VAGFPLSTQR RSGILHPHFS ASTRSGLDIS VPYYLNLAPN YDLTLVPRYM SKRGMQLGAD ARYVDYFYEG EARFEYLPND EMLGRSRYGY RFEHRHNLGQ GVSAALNWNG VSDDLYWQDL SSRLLQTSQA QLPRQVSLGY SPSPWLQSNL QVLRYQTLQI DPNNPVTRPY FLEPQLNLVG YKPNIWKTDF SMVGQFSRFT HVDAGKVQGD RMVFYPQLSL PIVHPAFQIT PKIGLHMTKY TLDQQAAGLP ESISRVLPTF SLDSTVILER EGDWFGRGYI QTLEPRLYYV NIPYKDQSQI PLFDSGLSDF NFAQIFSENR YSGYDRINDA NQLTAALTTR LLDGETGVER LKAMVGQRYY FKPQRVAITG ETTRQNDFSN LVAAVNGLVA PKTYADVAWE YNYRENISER FSAGVRFQPE LGKVMSASYR YTRDPLTTLS TVDQVDIAGQ WPISANWYAV GRYNYSLRDK RVLESIAGVE YNAGCWAVRL VGQHLGAISG AANDTVFFQL ELNDFGSIGS NPIGLLRRSI PGYGKINELP TSSSLLTSQ
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