Gene Daro_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3645 
Symbol 
ID3568290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3918396 
End bp3919169 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID637682118 
Productintegral membrane protein 
Protein accessionYP_286844 
Protein GI71909257 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.258813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC TTTCCGATTT CCATGCGCAA GGAATGTCCT TGCCCCACAT TCGGCGCATC 
GCCGCCGATC GCCCTTGGTT CTGGCTGCGC GCCGGCTGGC ACGACCTCAG GGCCGATCCT
TTGCCATCGC TGGCCTATGG CCTGCTGTTC GCACTGGGCG GCGATCTGAT CATTCTCGCG
CTGCTCGAAA CGCCGCATCT GCTGACCGTT TCCATTTCCG GCTTCTTCCT CGTCGCGCCC
TTGCTGGCTG CGGGGCTCTA CGAGCTGAGC CGCCGAACAG AAGCCGGCGA GAAAATTCTG
TTCATCGATT CGCTCAAATG CTTCGCGCGC AACGGCCAGT CGCTGGCCCT CTTCGGTCTG
ATCCTGGCGC TGATCACACT GATGTGGGAG CGCTTTTCTG CCGTCGCCTT TGCCCTGATC
GGCGCCGACT CGACGCCGAT AGCCAGTGCC TACCTGAACG AAATCCTGTT CGACGGCCAG
CACCTGGCCT TCACCGCCAC CTGGTTCCTG CTCGGCAGCG GATTGGCGCT CTTCGTCTAT
GCGTTGGCCG TCGTGTCAGT CCCGCTGATG CTCGACCGCG ATGCCGATGT CGCCACGGCC
ATAATGACCA GCCTGCGCAG CTTCATGCAG AACACCGGTT CGCTGCTGCT CTGGGCGGCC
CTGCTCGTTG GGCTGACTCT GCTCGGTTTC GCCACCCTGC TCTTCGGTCT GGTCGTGATC
ATGCCGATTC TCGGCCACGC TTCGTGGCAT GCCTACCGCG AACTTGTAGA ATAG
 
Protein sequence
MNPLSDFHAQ GMSLPHIRRI AADRPWFWLR AGWHDLRADP LPSLAYGLLF ALGGDLIILA 
LLETPHLLTV SISGFFLVAP LLAAGLYELS RRTEAGEKIL FIDSLKCFAR NGQSLALFGL
ILALITLMWE RFSAVAFALI GADSTPIASA YLNEILFDGQ HLAFTATWFL LGSGLALFVY
ALAVVSVPLM LDRDADVATA IMTSLRSFMQ NTGSLLLWAA LLVGLTLLGF ATLLFGLVVI
MPILGHASWH AYRELVE