| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3638 |
|---|
| Symbol | |
|---|
| ID | 3568283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3911849 |
|---|
| End bp | 3912799 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637682111 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_286837 |
|---|
| Protein GI | 71909250 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0000174199 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCA TCCGCACCCT GACGCTCCGC CAGTTGCAGA TTTTCGTCGT CGCTGCCCGC
CACCTGAGCT ACGCCCGCGC CGCCGAGGAA CTGCACCTGA CGCCCCCCGC CGTCTCGATG
CAGTTGAAAC AGCTCGAAGA CAACGTCGGC CTGCCACTGT TCGAACGCAT GGGCCGTGGC
GTCGCGCTGA CGGATGCCGG CGAGCTGCTG ATGCACCACG CCCTGCGCGT GCTCGGCGAG
ATCAAGGACG CCGAGGCCAA CCTTCAGGGC CTGCTCGGGG CCGAAGCCGG CCAGCTCTCG
GTCGGTCTGG TCAGCACTGC CAAATATTTC ATGCCCCGCC TGCTCGCCCA GTTTTCGCAG
GCGCACCCCG GCATCGAAGT GCAGTTCTCG GTCGGCAACC GCGAAACGCT GCTGCAAAAG
CTGCAGGACA ACGCCATCGA CCTCGCCGTG ATGGGCCGTA TCCCGGTCGA GATCGACGCT
CACGCCGAGC CGATGGCCAG CCACCCTTAC GTGCTGATCG GCCCGGCCGA CCACCCGCTG
CGTGACGCCC GCCGTTTTGA CCTGCAGGAG CTGCGCCACG AAACCTTTCT GCTGCGTGAG
GAAGGCTCGG GTTCGCGCCG GGTGGCCGAG GAAATGTTCA AGAACCATCT GTTCACACCG
GCCAAGACCA TTAGCATGGG CAGCAACGAA ACGATCAAGC AAGCGGTCAT GGCCGGCATG
GGCATCGCGC TGATTTCGCT GCACACCCTG CCGCTTGAAC TGAAAACCGC CGAGGTGGCC
GTCTTCGACG TCATCGGCAC ACCGATTGAA CGCACCTGGT ACGTCGTGCA CATGAACAGC
AAACGCCTGC TACCAGCTGG CCAGCGCTTC CGCCAGTTCC TGCTCGAACA GGCGACGCCA
GGGCTGGAGC AGGAATTCGG CCGCTATCTT GCGGCACGCA CCGCATCCTG A
|
|---|
| Protein sequence | MNFIRTLTLR QLQIFVVAAR HLSYARAAEE LHLTPPAVSM QLKQLEDNVG LPLFERMGRG
VALTDAGELL MHHALRVLGE IKDAEANLQG LLGAEAGQLS VGLVSTAKYF MPRLLAQFSQ
AHPGIEVQFS VGNRETLLQK LQDNAIDLAV MGRIPVEIDA HAEPMASHPY VLIGPADHPL
RDARRFDLQE LRHETFLLRE EGSGSRRVAE EMFKNHLFTP AKTISMGSNE TIKQAVMAGM
GIALISLHTL PLELKTAEVA VFDVIGTPIE RTWYVVHMNS KRLLPAGQRF RQFLLEQATP
GLEQEFGRYL AARTAS
|
|---|
| |