Gene Daro_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3627 
Symbol 
ID3567993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3901480 
End bp3902352 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content61% 
IMG OID637682100 
Productphosphoribulokinase/uridine kinase 
Protein accessionYP_286826 
Protein GI71909239 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.694975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.715068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA AACACCCCAT CATCGCTATC ACCGGTTCGT CCGGCGCCGG CACCAGCACG 
GTGATGCAGA GCTTCCAGCA CATCTTCCGT CGCGAGTGCC TCAAGGCGCA GATCGTCGAG
GGTGACTCGT TTCATCGCTA CGACCGCCTG GCCATGCGCG CCGAAATGAA GGCGCAGGAA
GAGGCCGGCA ATCGCAATTT CAGCCACTTC GGCCCGGAAG CCAATCTGCT TGAGGAATTG
CAGGACCTGT TCATCGCCTA CGGCCAGAAC GGCACCGGCA AAGTCCGCAA ATACCTGCAC
GATGCGGGCG AGGCCGAGCC TTTCGGCCAG CAACCGGGCA CCTTCACGCC GTGGCAGGAA
ATCACCGCGA CTACCGACCT GATGTTCTAC GAAGGCCTGC ACGGCGCCTA TGCCGATGAC
CAGATCGACA TCGCCAAACA GGTCGATCTC TGCGTCGGCG TGGTGCCGAC CATCAACCTC
GAATGGATCC AGAAGCTGCA CCGCGACCAG AAAATGCGCG GCTATTCGCA GGAAGCGGTC
ACCGACACCA TCCTGCGTCG GATGCCAGAT TACGTCAGCC ACCTTTGCCC GCAGTTCTCG
CGCACCCACG TCAATTTCCA GCGCGTGCCG ATCGTCGATA CCTCCAATCC CTTCATCGCC
CGCGACATCC CGACGGCCGA CGAGAGCATG GTGGTGATCC GCTTCGCCAA CCCGAAGGGC
ATCGATTTTC AGTACCTGAT CAACATCCTG CACGGCGCGA TGATGACCCG CCCGAACACG
CTGGTCGTTC CCGGCGGCAA GATGGGCCTG GCCATGCAGA TGATTTTCAC GCCGATGGTT
TTGCGCCTGA TGGACCACAA GCGCCGGGCC TAG
 
Protein sequence
MSVKHPIIAI TGSSGAGTST VMQSFQHIFR RECLKAQIVE GDSFHRYDRL AMRAEMKAQE 
EAGNRNFSHF GPEANLLEEL QDLFIAYGQN GTGKVRKYLH DAGEAEPFGQ QPGTFTPWQE
ITATTDLMFY EGLHGAYADD QIDIAKQVDL CVGVVPTINL EWIQKLHRDQ KMRGYSQEAV
TDTILRRMPD YVSHLCPQFS RTHVNFQRVP IVDTSNPFIA RDIPTADESM VVIRFANPKG
IDFQYLINIL HGAMMTRPNT LVVPGGKMGL AMQMIFTPMV LRLMDHKRRA