Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3617 |
Symbol | |
ID | 3567983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3884374 |
End bp | 3885210 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637682090 |
Product | peptidase C14, caspase catalytic subunit p20 |
Protein accession | YP_286816 |
Protein GI | 71909229 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 0.114842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000813771 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAAAAA AAGCACTTTG CATCGGCATC AACAACTACC CCGGCACCGA CATGGATTTG CAGGGTTGCG TCAATGACGC CAACGACTGG GCTGGCGTTC TGGCTGAACG CGGTTTCAAG GTAACGACGC TGCTTGACGA CCAGGCGACC AAGGCCGCCA TGGTCAAGGC CATGAGCGAT CTGATCGGCA AGGGCGCCAA GGGCGATACG CTGGTCATCA CCTATTCCGG GCACGGCACC TACCAGCCCG ACACCGACGG CGATGAGGCT GACGGACTCG ACGAGGCGCT CTGCCCCTAC GATCTGCAGA CCAAGGGCGA AGCCCTGATC GATGATGAAA TCCACGCCAT TTTCAATACC CGCAAGAGCG GTGTGCGCCT TGTGCTGATC TCGGATAGCT GCCATTCCGG TACCGTCACC CGCGCCGCCA AGGCCGAGAA GGATGCCGAT TTCCGGCCAC GCTTCATGCC GATGGGCAAC TGGCTGCCGG AAAAGCTGCT GCCCAAGAAC CGCGCAGGCA AGACAGCCGC CACGATGACC GCACCGGCCG GGTCTTCGCC GCTGTTGGCT GCGGCCCGGA CCAACCAGCT CGGCGATTTG CTGCTAGCAG GCTGCAAGGA AGGCCCCAAC AATTTCAGCT ACGACGCCAA AATCAAGGGG CGCTTCAACG GCGCCTTCAC CTACTACGCG CTGAAGGCCC TGAAAAACAT GAAGGAAGGT GCCACTTACG TCGACTGGTA CAAGGCCATC GGCAAATACC TGCCTTCGGC CAGCTATTCC CAAGTGCCGC AACTAGTTGG TAGCACCGGC GCACGCAAGG GCAAGATTTT CGAATAA
|
Protein sequence | MAKKALCIGI NNYPGTDMDL QGCVNDANDW AGVLAERGFK VTTLLDDQAT KAAMVKAMSD LIGKGAKGDT LVITYSGHGT YQPDTDGDEA DGLDEALCPY DLQTKGEALI DDEIHAIFNT RKSGVRLVLI SDSCHSGTVT RAAKAEKDAD FRPRFMPMGN WLPEKLLPKN RAGKTAATMT APAGSSPLLA AARTNQLGDL LLAGCKEGPN NFSYDAKIKG RFNGAFTYYA LKALKNMKEG ATYVDWYKAI GKYLPSASYS QVPQLVGSTG ARKGKIFE
|
| |