Gene Daro_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3617 
Symbol 
ID3567983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3884374 
End bp3885210 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID637682090 
Productpeptidase C14, caspase catalytic subunit p20 
Protein accessionYP_286816 
Protein GI71909229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.114842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000813771 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAA AAGCACTTTG CATCGGCATC AACAACTACC CCGGCACCGA CATGGATTTG 
CAGGGTTGCG TCAATGACGC CAACGACTGG GCTGGCGTTC TGGCTGAACG CGGTTTCAAG
GTAACGACGC TGCTTGACGA CCAGGCGACC AAGGCCGCCA TGGTCAAGGC CATGAGCGAT
CTGATCGGCA AGGGCGCCAA GGGCGATACG CTGGTCATCA CCTATTCCGG GCACGGCACC
TACCAGCCCG ACACCGACGG CGATGAGGCT GACGGACTCG ACGAGGCGCT CTGCCCCTAC
GATCTGCAGA CCAAGGGCGA AGCCCTGATC GATGATGAAA TCCACGCCAT TTTCAATACC
CGCAAGAGCG GTGTGCGCCT TGTGCTGATC TCGGATAGCT GCCATTCCGG TACCGTCACC
CGCGCCGCCA AGGCCGAGAA GGATGCCGAT TTCCGGCCAC GCTTCATGCC GATGGGCAAC
TGGCTGCCGG AAAAGCTGCT GCCCAAGAAC CGCGCAGGCA AGACAGCCGC CACGATGACC
GCACCGGCCG GGTCTTCGCC GCTGTTGGCT GCGGCCCGGA CCAACCAGCT CGGCGATTTG
CTGCTAGCAG GCTGCAAGGA AGGCCCCAAC AATTTCAGCT ACGACGCCAA AATCAAGGGG
CGCTTCAACG GCGCCTTCAC CTACTACGCG CTGAAGGCCC TGAAAAACAT GAAGGAAGGT
GCCACTTACG TCGACTGGTA CAAGGCCATC GGCAAATACC TGCCTTCGGC CAGCTATTCC
CAAGTGCCGC AACTAGTTGG TAGCACCGGC GCACGCAAGG GCAAGATTTT CGAATAA
 
Protein sequence
MAKKALCIGI NNYPGTDMDL QGCVNDANDW AGVLAERGFK VTTLLDDQAT KAAMVKAMSD 
LIGKGAKGDT LVITYSGHGT YQPDTDGDEA DGLDEALCPY DLQTKGEALI DDEIHAIFNT
RKSGVRLVLI SDSCHSGTVT RAAKAEKDAD FRPRFMPMGN WLPEKLLPKN RAGKTAATMT
APAGSSPLLA AARTNQLGDL LLAGCKEGPN NFSYDAKIKG RFNGAFTYYA LKALKNMKEG
ATYVDWYKAI GKYLPSASYS QVPQLVGSTG ARKGKIFE