| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3601 |
|---|
| Symbol | |
|---|
| ID | 3568265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3861238 |
|---|
| End bp | 3864414 |
|---|
| Gene Length | 3177 bp |
|---|
| Protein Length | 1058 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637682074 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_286800 |
|---|
| Protein GI | 71909213 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000186379 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCG CCGCCCGCCT CGTCAATCGC CCGTCGCCAC CGATGCCGGC GGCTGCGGTC
AAGGTGGCCG AGCCAGTGGT GGCGCAGACG GCGCCGATCC GCATCCAGTG CCAGAGCCTG
CGCGTTTCTA CACCCGGCGA TGCGGCCGAA GTCGAGGCCC GGCATGTCGC GCGCAGCATC
GTCAGCATGC CGGCGACTGC GGCAGCCCGG CCGGCCAGCG TGCTCAGTCC GCCCACGCTG
CATCGGGCCA ATCCGGTGCG CGGGCCGGCG GTTGCCGCGC CCACCCGGCC GCAGCAAACG
GCCGCCAAAC CAACGTCCAG CGGTGGCGAG CCGCTGCCCG AGGCGGTGCG CCAGGACATG
GAGTCGCGCT TCGGCGCCGA TTTCAGCGCC GTGCGCATCC ATCGCGATGC CCGCGCCGCG
CAAGCCAGCA CTGCCCTCAA CGCGGCGGCC TTCACGGTCG GCAACCAGAT CCATTTCGGG
GCCGGCCAGT TCAACCCGGG CAGCGGCGAA GGCCGCGAGC TGATCGCCCA CGAACTGACC
CACACCATCC AGCAGGGCGC CGCACCGCAA GCCCAACGGC AGATCCAGCG CAGCCCGGCC
CCGCTGGTCG TCGAGCGCAG TGCTCCAGCT GTCCAGCGCC TCGGCCTTGG CGATGCGCTC
AATTACTTTG CCGAGCACGC CAATTTCATC CCCGGCTTCC GGATGTTCAC GCTGGTCCTC
GGTGTCAATC CGATCAACAT GCGGGCCGTT GACCGCTCGC CGGGCAACCT GCTGCGCGCT
GTCGTCGAGC TGATGCCGGG CGGCGCGCTG ATCACCCGGG CGCTGGATGG CTACGGCATC
ATCGACCGCG TTGCCGGCTG GGTGCAGCAG CAGATGAGCA GCCTCGGGCT GGTCGCCAGC
AGCATCCGGC AGGCGGTCGA CCGCTTCCTC GACTCGCTGA GCTGGACCGA CATCTTCGAT
CTGGGCGGCG TCTGGGAACG CGCCAAGCGC ATCGTTACCG AGCCGATCGC GCGCATCACC
AGCTTTGTCG GCAATCTGGT TTCCGGCATC CTCCAGTTCA TCCGCGATGC CGTGCTGCGA
CCGCTGGCCG GGCTGGCGCA AGGGACGCGT GGCTGGGATC TGCTCTGCGC CGTACTCGGC
CGAAACCCGA TTACCGGCGA CGCGGTGCCG CGCACGGCCG AAACGCTGAT CGGCGGCTTC
ATGCGCCTGA TTGGGCAGGA GGAAGTCTGG CGCAATCTGC AGGAAAGCCG CGCCGTGCCG
CGGGCGATGG CCTGGTTCCA GGGCGCGCTG GCCGGCCTGA TGGGCTTCGT CACCGCCTTG
CCCGGCCTGT TCATGGACAC CCTGCGCAGC CTCGGCATCA ACGACCTGCT GACCCCGGTC
CAGACTTTCG GGCGCATCGT CCGCGTCTTC GGCGATTTCG CCGGGCGCTT CGTCGGCTGG
GCCGGTGCGC AGGTGATGAG CCTGCTCGAA ATCATCTTCG ACGTCGTCGC GCCGGCCGTG
ATGCCCTATA TCCGCCGGGC CGCCGGCGCC TTCCGGACCA TCGTCGCCAA TCCGGTCAAT
TTCGTCCGCA ATCTGGTCCG CGCCGCCGTT CAAGGCTTCC GCCAGTTCGC CAGCAACATC
CTGACCCACC TGCGCGCAGC GCTGATCGGC TGGCTGACCG GGGCGATGGG CGGCGCCAAT
ATCTACATTC CGCAGGCGCT GACGCTGCAG GAAATCATCA AGTTCGTGCT CAGCGTGCTC
GGCCTGACCT GGCAGAACAT CCGCAGCAAG CTGGTCCGCG CCGTCGGCGA AACGGCGGTC
AATGCCATGG AAACCGGCTT CGACATCGTC GTCACGTTGG TTCGCGACGG GCCGGCCGCT
GCTTGGGAAC GCATCCGCGA AAGCCTCTCC AACCTGCGCG AAATGGTCAT GGAGCAGATC
ATGGCCTTCG TCCAGAACAA CATCGTGATG GCCGCCGTGA CCCGGCTGGT CAGCATGCTC
AACCCGGCCG GCGCCTTCAT CCAGGCCATC ATCGCCATCT ACAACACGGT GATGTTCTTC
GTCGAACGCC TGCGCCAGAT CGCCCAGGTG GCCGCTGCCT TCATCGACTC GATTGCCGCC
ATCGCCGGCG GCGTCATCGC GGCTGCCGCC AACCGCGTCG AACAGACGAT GGCCGGGCTG
CTGACGCTGG TCATCAGCTT CCTCGCCCGA CTGGTCGGCC TCGGCCGGGT CAGCGATGCG
GTGACTAACA TCATCAACCG CATCCGCGCC CCGATCGACC GGGCGCTCGA TCGCGTGGTA
GCCTGGATCG TCAGTCTCGG CCGGCGCTTT ATGACCGCCG CCCGCAGCGC GGCCGGGCGC
GTCGCCGAAT GGTGGCGCCA GCGCAAGCCG TTCCGGACGG CCGGCGGCGA AAGCCACGAG
GTCTATTTCG TCGGCGACGA GCGCAATCCG CGCCCGATGG TGGCCAGCCG AGATCCGCAG
CCGGTCGAAA CGCGCCTCGA CCGTTTCCTG GCTGCGGCCA ACGAGTCCGG CGCCCCGGCC
CGCAAGCGCA ACGCCATCCC GCTGATCGGC GCGACGCGAA CGGCTGTGCG GGCCAACGCC
GATGATCCCA TCGTCGTCAC CAACCTGCGT ACCCTGTTCG GCATCTTCGA CGATCCCTCG
GCGCCGCGCG TCACCCGCTA CCAGCCGCGT ACCCAATCGC TGGGCGGCGA TACGGTCGGC
GTGGGCATGA CCATCGACTG GCTCAACGAC GCCTGGCGCC GAAGCCACCC CGGCAGCCCG
CCTCGCTCCG GCGCGCAGAG CACGCTGATG AGCAAGCTCG AAACCGATCC CGGTGAATCC
AGCCCCGACA AATACATCCG CGGACACCTG CTCAACGAAC ACATTGGCGG CATCGGTGAC
GCCACCAACC TCTTCCCGAT CACCGGCAAC GCCAACAGCC GCCACCTGCA CTCGACCGAA
AGCCGGGTCA AGCGTTGGGT CGATGTGCCC AGCAACTGGG TGTTCTACGA AGTTACGGTA
GACGGCATCA GCTCGCGGCT CAATGCCAGC GACGTCACCC AGAACTACGT CAACGCCACG
TTCAACTGCC GCGCCGTGCT CAAGGACGAC GACGGGACAG AAAAGGAAAG CTACATGACT
GCGATCAGTT CAACCTATCG CGTTCGCAAC GAAGCACGCG CCTTCCAGGT GCGCTGA
|
|---|
| Protein sequence | MEAAARLVNR PSPPMPAAAV KVAEPVVAQT APIRIQCQSL RVSTPGDAAE VEARHVARSI
VSMPATAAAR PASVLSPPTL HRANPVRGPA VAAPTRPQQT AAKPTSSGGE PLPEAVRQDM
ESRFGADFSA VRIHRDARAA QASTALNAAA FTVGNQIHFG AGQFNPGSGE GRELIAHELT
HTIQQGAAPQ AQRQIQRSPA PLVVERSAPA VQRLGLGDAL NYFAEHANFI PGFRMFTLVL
GVNPINMRAV DRSPGNLLRA VVELMPGGAL ITRALDGYGI IDRVAGWVQQ QMSSLGLVAS
SIRQAVDRFL DSLSWTDIFD LGGVWERAKR IVTEPIARIT SFVGNLVSGI LQFIRDAVLR
PLAGLAQGTR GWDLLCAVLG RNPITGDAVP RTAETLIGGF MRLIGQEEVW RNLQESRAVP
RAMAWFQGAL AGLMGFVTAL PGLFMDTLRS LGINDLLTPV QTFGRIVRVF GDFAGRFVGW
AGAQVMSLLE IIFDVVAPAV MPYIRRAAGA FRTIVANPVN FVRNLVRAAV QGFRQFASNI
LTHLRAALIG WLTGAMGGAN IYIPQALTLQ EIIKFVLSVL GLTWQNIRSK LVRAVGETAV
NAMETGFDIV VTLVRDGPAA AWERIRESLS NLREMVMEQI MAFVQNNIVM AAVTRLVSML
NPAGAFIQAI IAIYNTVMFF VERLRQIAQV AAAFIDSIAA IAGGVIAAAA NRVEQTMAGL
LTLVISFLAR LVGLGRVSDA VTNIINRIRA PIDRALDRVV AWIVSLGRRF MTAARSAAGR
VAEWWRQRKP FRTAGGESHE VYFVGDERNP RPMVASRDPQ PVETRLDRFL AAANESGAPA
RKRNAIPLIG ATRTAVRANA DDPIVVTNLR TLFGIFDDPS APRVTRYQPR TQSLGGDTVG
VGMTIDWLND AWRRSHPGSP PRSGAQSTLM SKLETDPGES SPDKYIRGHL LNEHIGGIGD
ATNLFPITGN ANSRHLHSTE SRVKRWVDVP SNWVFYEVTV DGISSRLNAS DVTQNYVNAT
FNCRAVLKDD DGTEKESYMT AISSTYRVRN EARAFQVR
|
|---|
| |