| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3593 |
|---|
| Symbol | |
|---|
| ID | 3568257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3849935 |
|---|
| End bp | 3850984 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637682066 |
|---|
| Product | glyceraldehyde 3-phosphate dehydrogenase |
|---|
| Protein accession | YP_286792 |
|---|
| Protein GI | 71909205 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00148631 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCCCTTCA ACGTGCCCAA TACTGCCCCA CTGCGTCTTG CCATCAACGG TTATGGCCGT
ATCGGTCGCT GTTTCCTGCG TGCACTACTG GAGTCCTCGG TCGCACATAA GCTTCAGGTC
GTCGCCATCA ATGAGCCGGC CAACCTGGAG AGCATGGCCT ACCTGACCCG CTTCGATTCG
ACGCACGGCC GCTTTCCCGG CAATGTCGAG ATCACCGGCG ACAAACTGCT GATTGATGAC
CAGCCCATTC GCGTCAGTCA CGCCCGGACC CCGGAAGAAG TGGACTGGAG CAACATCGAT
CTGGTCGTCG AGTGCTCAGG CATCTACGGC CGGCGCCCGG AACTGACCCG TTTTCTCGAT
GCTGGTTGCC CGCGTCTGCT GCTGTCCCAC CCGGGTCTCA GCGCTGACGA TGTCGATGCC
ACCATTGTCA CCGGCATCAA CCAGCAGTCG CTGACCGGCA AGGAGCGGCT GGTTTCGGCC
GCCTCCTGCA CGACCAATGC CATCGTGCCG CTGCTCGACC TGATCGATCG CGAGATCGGC
ATCGAACAGG CCATGCTGAC CACGCTGCAT TCGGTCATGA ACGACCAGCC GCTGATCGAC
GGCTATCATC ACGATGACCT GCGGCGCACC CGTTCCGCCA TGCAGTCGAT CATCCCGGTA
TCGACCGGCC TGGCCCGTGG CGTCGAACGC CTGTTGCCGC AACTGGCCGG CCGCGTCCAG
GCCAAGGCGA TCCGCGTGCC GACGACCAAT GTCTCGGCCA TCGACCTGAC GATCAATACC
CAGCGCCCGA TGTCGGCGCA CAGTATCAAT ACCCTGCTGG CCAACGCTGC CCATGGCCCG
CTGAAGAAAC TGGTCGCCTA TTCCGAGGCC GCCCACGCCT CGATCGATTT CAATCACGAC
CCGCATTCGG CCATCGTCGA TGGCAGCCAG ACGCGGACCA GCGGCACGCA CCTGGTCAAC
CTGTTCGTCT GGTTCGACAA CGAATGGGGC TTCGCCAACC GCATGCTCGA GGTCGCCGAC
CATTGGTCGC GGCTTTGGCC AACGCGGTAG
|
|---|
| Protein sequence | MPFNVPNTAP LRLAINGYGR IGRCFLRALL ESSVAHKLQV VAINEPANLE SMAYLTRFDS
THGRFPGNVE ITGDKLLIDD QPIRVSHART PEEVDWSNID LVVECSGIYG RRPELTRFLD
AGCPRLLLSH PGLSADDVDA TIVTGINQQS LTGKERLVSA ASCTTNAIVP LLDLIDREIG
IEQAMLTTLH SVMNDQPLID GYHHDDLRRT RSAMQSIIPV STGLARGVER LLPQLAGRVQ
AKAIRVPTTN VSAIDLTINT QRPMSAHSIN TLLANAAHGP LKKLVAYSEA AHASIDFNHD
PHSAIVDGSQ TRTSGTHLVN LFVWFDNEWG FANRMLEVAD HWSRLWPTR
|
|---|
| |