Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3586 |
Symbol | |
ID | 3567896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3841047 |
End bp | 3841784 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637682059 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_286785 |
Protein GI | 71909198 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 0.982939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.09223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAC CCCGTTTTTA CTGCCGAGAA GCCCTTTCGC CGGGGGCGCA TATTGAACTT CCCGAGCCGG TGGCTCGTCA TGCGGTGCGC GTATTGCGCC TGCCACCCGG GGCGCCGATG GTGCTCTTCG ACGGACGTGG CGGCGAGTAT CCGGCACATA TCGAACGTAT CGAGCGTGAT CGGGTGTTTG CAGTGCTCGG TGCCTGGTGC GAAATAGAGT GCGAATCCCG CTTGGCGATC ACGCTGGTGC AGGCCTTGCA GGCTGGCGAC AAGATGGATT TCACCATTCA GAAGGCCGTC GAGCTGGGCG TGCGCGACAT TGTGCCGGTC GAAAGTCGGC GCAGTGTCAT CCGTCTGGCC GGGGAGCGGG CCGCCAAGCG GGTGGCTCAT TGGCAGGGCG TTGCCGCTTC GGCCTGCGAG CAGTGCGGGC GCAATCAGGT GCCGCTGGTG GCGCCCCTGG AAAAACTGGA ACACTGGCTG GCCAGACCAA GCCATGGTGA GTTGCGCCTG ATGCTGGCGC CGGACGCCGA GGATACCTTG GCCTCAATCC GGCCGGTTGG TCAGGTTCAG TTGCTGATCG GGGCCGAAGG GGGGCTCGAT CCGCAGGAGG TGATGGCGGC CAGGCAGGCA GGATTTCAGG CGGTCCGCCT GGGGCCGCGT GTCTTGCGCA CGGAAACGGC GGGTCTGGCA GCGCTGGCGG CGCTGCAGGC CTTATGGGGC GATTTCAGGG AGGGTTAG
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Protein sequence | MNSPRFYCRE ALSPGAHIEL PEPVARHAVR VLRLPPGAPM VLFDGRGGEY PAHIERIERD RVFAVLGAWC EIECESRLAI TLVQALQAGD KMDFTIQKAV ELGVRDIVPV ESRRSVIRLA GERAAKRVAH WQGVAASACE QCGRNQVPLV APLEKLEHWL ARPSHGELRL MLAPDAEDTL ASIRPVGQVQ LLIGAEGGLD PQEVMAARQA GFQAVRLGPR VLRTETAGLA ALAALQALWG DFREG
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