Gene Daro_3586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3586 
Symbol 
ID3567896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3841047 
End bp3841784 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID637682059 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_286785 
Protein GI71909198 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.982939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.09223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAC CCCGTTTTTA CTGCCGAGAA GCCCTTTCGC CGGGGGCGCA TATTGAACTT 
CCCGAGCCGG TGGCTCGTCA TGCGGTGCGC GTATTGCGCC TGCCACCCGG GGCGCCGATG
GTGCTCTTCG ACGGACGTGG CGGCGAGTAT CCGGCACATA TCGAACGTAT CGAGCGTGAT
CGGGTGTTTG CAGTGCTCGG TGCCTGGTGC GAAATAGAGT GCGAATCCCG CTTGGCGATC
ACGCTGGTGC AGGCCTTGCA GGCTGGCGAC AAGATGGATT TCACCATTCA GAAGGCCGTC
GAGCTGGGCG TGCGCGACAT TGTGCCGGTC GAAAGTCGGC GCAGTGTCAT CCGTCTGGCC
GGGGAGCGGG CCGCCAAGCG GGTGGCTCAT TGGCAGGGCG TTGCCGCTTC GGCCTGCGAG
CAGTGCGGGC GCAATCAGGT GCCGCTGGTG GCGCCCCTGG AAAAACTGGA ACACTGGCTG
GCCAGACCAA GCCATGGTGA GTTGCGCCTG ATGCTGGCGC CGGACGCCGA GGATACCTTG
GCCTCAATCC GGCCGGTTGG TCAGGTTCAG TTGCTGATCG GGGCCGAAGG GGGGCTCGAT
CCGCAGGAGG TGATGGCGGC CAGGCAGGCA GGATTTCAGG CGGTCCGCCT GGGGCCGCGT
GTCTTGCGCA CGGAAACGGC GGGTCTGGCA GCGCTGGCGG CGCTGCAGGC CTTATGGGGC
GATTTCAGGG AGGGTTAG
 
Protein sequence
MNSPRFYCRE ALSPGAHIEL PEPVARHAVR VLRLPPGAPM VLFDGRGGEY PAHIERIERD 
RVFAVLGAWC EIECESRLAI TLVQALQAGD KMDFTIQKAV ELGVRDIVPV ESRRSVIRLA
GERAAKRVAH WQGVAASACE QCGRNQVPLV APLEKLEHWL ARPSHGELRL MLAPDAEDTL
ASIRPVGQVQ LLIGAEGGLD PQEVMAARQA GFQAVRLGPR VLRTETAGLA ALAALQALWG
DFREG