Gene Daro_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3557 
Symbol 
ID3566369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3811812 
End bp3812504 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID637682030 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_286756 
Protein GI71909169 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA CACCCGCCAA AGTTCTGATC ATCGAGGACG AGAAGCAGAT TCGCCGGTTC 
GTGCGGGTCG CAGTCGAAGA AGAGGGCTGC CTGGTCAGCG AGGCCGAAAC GATGAGCCAG
GGTCTGCTGG AAGCCGGGTC CCGGAAGCCA GACCTGTTGA TTCTCGACCT CGGTCTGCCT
GACGGGAATG GCATCGACCT GATCCGCGAT TTACGCAGCT GGTCGGATGT GCCGGTGCTT
ATTCTGTCCG CCCGTTCGCA AGAGAACGAC AAGATCGATG CACTGGATGC CGGGGCTGAC
GATTACCTGA CCAAGCCCTT CAGTGTCGGC GAACTGCGGG CAAGGGTTCG GGCCTTGCTG
CGTCGACGCA GTCGGAGTGG CGAGGCAGCA TCCCCCGTCA TTGAGTTCGG GAATGTCTTG
GTGGATATGT CGCGTCGCCT GGTAACGCGT GACGGCGAGC CAGTACATCT GACGCCCATT
GAATACCGCT TGCTCTCAGC CCTGTTGGCA CACCCCGGCA AGGTGCTGAC CCAGCGCAAT
CTGCTGCGGG AAATCTGGGG ACCATCCTTC ATCGAGAGCA GCCACTACCT GCGTGTCTAT
GTCGGGCACT TGCGGCAAAA ACTCGAAGAC GACCCGACCC AGCCGACACA CCTTTTGACC
GAAACCGGCG TCGGTTACCG CTTCCAGCCT TAA
 
Protein sequence
MNTTPAKVLI IEDEKQIRRF VRVAVEEEGC LVSEAETMSQ GLLEAGSRKP DLLILDLGLP 
DGNGIDLIRD LRSWSDVPVL ILSARSQEND KIDALDAGAD DYLTKPFSVG ELRARVRALL
RRRSRSGEAA SPVIEFGNVL VDMSRRLVTR DGEPVHLTPI EYRLLSALLA HPGKVLTQRN
LLREIWGPSF IESSHYLRVY VGHLRQKLED DPTQPTHLLT ETGVGYRFQP