Gene Daro_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3556 
Symbol 
ID3566368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3809921 
End bp3811801 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content58% 
IMG OID637682029 
ProductK+ potassium transporter 
Protein accessionYP_286755 
Protein GI71909168 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAG AACAAGACAA GAAGCGTCTG GCGACGCTCA CACTGGCTGC CTTGGGGGTC 
GTTTATGGCG ACATTGGCAC CAGCCCCCTG TACTCCATCA AGGAGGTGTT CGGCGGCGCC
CACCATCCGG TACCCATTAC CCCGGATAAC GTTCTGGGCA TTCTGTCGCT TTTCTTCTGG
TCGCTCATCA TCGTGGTGAC GCTGAAGTAC GTCTCCTTCA TCATGCGGGC CAATAACCGC
GGTGAGGGCG GCATCATCGC ACTGATGACG CTGGCGATGC ACAAGGGGGT TGCCGGTTCC
TGGCAGCAAA AGATGCTGGT GTTGCTTGGC CTGTTTGGTG CCGCCCTGTT CTATGGAGAC
GGTATCATTA CGCCCGCCAT TTCCGTTCTT TCAGCCGTCG AGGGCCTGGA AATCCTGACT
CCGGCCTTCA AGCCCTACAT TCTGCCTATC ACGCTGATCA CCCTGATCGG ACTGTTCATT
TTTCAGCGCC GCGGGACAGC CAGTGTTGGT GCGTTGTTCG GGCCGGTCAT GGTCATCTGG
TTTGCAGTCA TAGCGGTCCT CGGGGCGGCT GCCATTGTCG AGAACCCGGC GGTGCTTGCC
GCAGTCAATC CTGTCCATGC TTTCCATTTT CTGACTGGCA ATTCGCTGCT CGGCTTCTTT
GCGCTGGGGG CGGTTGTGCT GTGCATCACC GGTGGCGAAG CCCTGTATGC CGACATGGGC
CACTTCGGCG CCAAACCGAT TCAGTACGCC TGGCTGGGTT ATGTCCTGCC GGCCCTGCTC
CTCAATTATT TCGGTCAGGG CGCGCTGCTG CTGGCCGACC CGAGCAGCGT CGAGAATCCC
TTTTACCTGC TTGCCCCGGA GTGGGGCAGG TATCCCCTGG TTGCCCTGGC GACAGTGGCG
ACGGTGATTG CATCGCAAGC AGTGATCTCC GGTGCGTTCT CAATCACGCA GCAGGCCATT
CAACTCGGCT ACACGCCACG GCTTGAAATC CAGCACACTT CCGACGAGGA AATCGGTCAG
ATTTATCTGC CGGCGATCAA CTGGATGATG CTCATTGCGA TCATTGCGCT GGTCATCGAA
TTTGGTTCAT CTTCCAATCT GGCGGCTGCC TACGGGATTG CGGTCACCGG CACGATGCTG
ATTACCAATA TCCTGGCCAT TGCCGTTGCT GTTCGCCTCT GGAACTGGAG TCCGGCCAGG
GCGATGCTGG GGGCCTTGCC TTTCATCTGC ATTGACCTGG GGTTCTTTCT GGCCAATTCC
GTCAAGATCG CCGACGGTGG ATGGTTTCCG CTCGCCTTTG GTCTGGCCGT CTTTATTTTG
CTGACCACCT GGAAACGGGG GCGTGAGTTG CTTGGGCTGC GCCTGGCGGC CGACGCCATG
CAACTGAAAT CGTTTGTGGT CGATATCGCG GGCAGCGGGA TTGGGCGAGT TCCCGGGACG
GCCATCTTCA TGACCCCCGA CCCGGAACTG GTTCCCCACG CCATGCTGCA CAGCCTGAAA
CATTACAAGG CCTTGCACGA GCAGGTTGTC GTGATGAGCG TGAAGGTCTT CGATGTGCCC
TATGTGCCGG ATGTCGACCG CGTCGAGGTG CATCGCCTGA GCAACAATTT CAGCCAGGTT
GTCGTCCAGT ATGGTTTCAA GGACGATCCG GATATTCCCG CTGCGCTGGC GCTGTGCGGG
GAGGCCGGGC TGGCAATCGA ACCAATGGAT ACCTCCTTCT TCCTTGGTCG AGAAACCTTG
ATTCCGAAAC TGGGTTCCGA GATGGCTTAC TGGCGGGAGC TGTTATTCGT GGCGATGTTC
CGTAACGCCG GCAGCGCGAC GGCGTTCTTC AAGATTCCAT CGAATCGTGT GGTCGAGCTT
GGCTCCCAAG TGGTGCTTTA A
 
Protein sequence
MHKEQDKKRL ATLTLAALGV VYGDIGTSPL YSIKEVFGGA HHPVPITPDN VLGILSLFFW 
SLIIVVTLKY VSFIMRANNR GEGGIIALMT LAMHKGVAGS WQQKMLVLLG LFGAALFYGD
GIITPAISVL SAVEGLEILT PAFKPYILPI TLITLIGLFI FQRRGTASVG ALFGPVMVIW
FAVIAVLGAA AIVENPAVLA AVNPVHAFHF LTGNSLLGFF ALGAVVLCIT GGEALYADMG
HFGAKPIQYA WLGYVLPALL LNYFGQGALL LADPSSVENP FYLLAPEWGR YPLVALATVA
TVIASQAVIS GAFSITQQAI QLGYTPRLEI QHTSDEEIGQ IYLPAINWMM LIAIIALVIE
FGSSSNLAAA YGIAVTGTML ITNILAIAVA VRLWNWSPAR AMLGALPFIC IDLGFFLANS
VKIADGGWFP LAFGLAVFIL LTTWKRGREL LGLRLAADAM QLKSFVVDIA GSGIGRVPGT
AIFMTPDPEL VPHAMLHSLK HYKALHEQVV VMSVKVFDVP YVPDVDRVEV HRLSNNFSQV
VVQYGFKDDP DIPAALALCG EAGLAIEPMD TSFFLGRETL IPKLGSEMAY WRELLFVAMF
RNAGSATAFF KIPSNRVVEL GSQVVL