| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3551 |
|---|
| Symbol | |
|---|
| ID | 3567629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3803227 |
|---|
| End bp | 3804870 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637682024 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_286750 |
|---|
| Protein GI | 71909163 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.141392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.701436 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCA GACCAATCCT TCGTTCCATC GAGCGCTTCC TGCTGTCGCC GTTCAGCCTG
GTGCTGGCGA TCGTCATCGC TTTCGTGCTC AATGCCTACA GCCTGCCGCT GACCGATGTC
GACGAAGGGG CGTTTTCCGA AGCGACGCGC GAAATGATGG CGCGTGGCAA CCTGATCTCG
CCGACCCTGA ACGATGCGCC GCGCCACGAC AAGCCGATCC TGATCTACTG GGCGCAGGCT
GTTTCAGTCA GTGTGCTCGG GGTCAGTGAA ATCGGCTTCA GGTTGCCGTC GATCATCGCC
AGCATCCTTT GGTTGCTCTT CCTCTACCGC TTCTGTCTGC ACCATGCCGA CCGGCGGACG
GCGCAGGTCG CTGCGCTGGT CATGGCCTTG TCGCTGGCCG TTGGCTTCAT CGCCAAGGCC
GCGATTTCGG ATGCGCTGCT CAACCTGTTC ATCGCCCTGT CGATGTTCGG CATCTACGAC
TTCTTTTGCT CCAGCCGGGA TGGCAAGAGC CCGCAACAAA TCCGCCGGCT CCTGTTCTTC
GTCTATGCCA TGCTCGGCCT CGGCTTCCTG ACCAAGGGGC CGGTCGCGGT GATGTTCCCG
CTGTTGATCA GCGGTATTTT CTTCGTCTCG GCCGGCGCCT GGCGTGACTG GCTGAAAGCG
GCCTTTTTCT GGCCGGGCTG GCTGCTTTTC CTGGCCATCG TCGTGCCCTG GCATGTGCTG
GTTTATCTGG ATCAGGGCGA CGCCTTCTTC CGCGGTTTCT ACCTGAAGCA CAACCTGAAT
CGCTACTCCA ATACCTTCGA GGGGCATGGC GGCAAGTGGT ACTACTACCT CGTCGTCCTG
CCCTTCGTGC TGATGCCGTT CACCGGCTGG CTGCTCGCCA TCGTCGGCCA GCTGCTCAGG
AAGCTGTGCT CGGTGCCGCT CGGCCTGGCT TACGGCGAGG GACTGTTCGA ACGCTACCTG
ATCCTGTGGT TCGTCGTCGT CTTCGGCTTC TTCTCCTTCT CCGGGACGCA GTTGCCGCAC
TACCTGCTCT ACGGCTGCAC GCCGCTCTTC ATCCTGCTCG CCCGCTATCG TCCGGAGTTC
GAGCGGCGCT GGCTGGCCTA TCTGCCGCTG ATCGCCTTTA CCCTGTTGCT GGCTGCCTTG
CCGGAAATTC TGGTCTTTGC TGCCGCCAAG GCGGGCAAAC CTTTTGAGAA GACGCTGCTC
GACGGCCTGG TTGCGGCCTT CTCCGACGAA GCGCGCTGGT TGCTCCCCTT GCTCGCCGTT
GCCGTCATTG CATTGACCTT GTGGCGCAAC TTGCCGGTCT GGCAAGGGCT GATCATTGCC
GGGCTACTGC AGGCACTGGT CGTTGGCGCG GTCATCGCGC CGCGAGTGAT CGGTGTCACC
CAGGGGCCGA TCCGCGAGGC GGCCATGGTC GCCAAACAAA GTGGCGGCAC GGTGGTGGCC
TGGCGCATCA TCATGCCCAG CTTCAGCGTC TATCGGCAGT CGGCGACGCC AACCAGGGTG
CCCGTTGAGG GAGAGCTGGT GATCACCCGT ACCGACCGCC GGCATGAGGT GCAGGCGCTG
CTGGCTTCCG GTCTGACGAT GCGCGATATC TACGTGAAGA GTTTCGTGAC CCTGGCTCGC
GTCGAACGCG AGGCGGCGCG GTGA
|
|---|
| Protein sequence | MQARPILRSI ERFLLSPFSL VLAIVIAFVL NAYSLPLTDV DEGAFSEATR EMMARGNLIS
PTLNDAPRHD KPILIYWAQA VSVSVLGVSE IGFRLPSIIA SILWLLFLYR FCLHHADRRT
AQVAALVMAL SLAVGFIAKA AISDALLNLF IALSMFGIYD FFCSSRDGKS PQQIRRLLFF
VYAMLGLGFL TKGPVAVMFP LLISGIFFVS AGAWRDWLKA AFFWPGWLLF LAIVVPWHVL
VYLDQGDAFF RGFYLKHNLN RYSNTFEGHG GKWYYYLVVL PFVLMPFTGW LLAIVGQLLR
KLCSVPLGLA YGEGLFERYL ILWFVVVFGF FSFSGTQLPH YLLYGCTPLF ILLARYRPEF
ERRWLAYLPL IAFTLLLAAL PEILVFAAAK AGKPFEKTLL DGLVAAFSDE ARWLLPLLAV
AVIALTLWRN LPVWQGLIIA GLLQALVVGA VIAPRVIGVT QGPIREAAMV AKQSGGTVVA
WRIIMPSFSV YRQSATPTRV PVEGELVITR TDRRHEVQAL LASGLTMRDI YVKSFVTLAR
VEREAAR
|
|---|
| |