| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3549 |
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| Symbol | |
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| ID | 3567627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3799074 |
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| End bp | 3802022 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637682022 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_286748 |
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| Protein GI | 71909161 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.288363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTCG TATTCAATAC CCTGTCGGTT GCCGAAGCCT TGGTATTCCG TCGAACGCTG
CTGGCAATCG TCGTGGCGAT CAATTGCCTG GCGATTTGCG TCGGCGCCTA CACCTTGTAC
GACAGTCGGC AGCTCTACGA TCGCCAAGCC GAAGCGGAAA GCCGGAATCT GGCGCGTGCC
CTCGATGAAA ACCTTGCCGT CAGCCTGGGG CGTGTCGAGG TGACACTGGG TAGCGTGGTC
GATCGTCTCG AAGAAGAGTT GAACCGACAT GCCACGCTCC AGGAGGTGTC TCTGGCGTCG
TTCATCAAAC GTGCGGAGAG CCATCTTGGC GCCCACGTCA GGGTTCGGGT GTCGGATGAG
AGCGGCATGG TGATTCTGGG CGGGGATGTG GTGCCGGGAA CCACCACATG GGGAGGGCGG
AGTTTTTTCA GGCAACTCAA GGAGCATCCG GAAACCGGTA CCCTGATCAA CGACCCGGTG
CTCGGCTACG TCACCAAGGT CCACCTGGTT CCGGTCGCGG CACGCTATCG CTATCCGGAT
GGCCGATTTG CCGGCATCGT CTCGGTCGCG GTTCCCGTTT CCTACTTGTC CGATCAGCTG
GCCAAGCTCG ACTATGGCCC CCATGGCCTG GCTGTCCTGC GCGATGCCAA ACTCAACCTG
ATCACCCGCT ATCCTGCATT GAACAAGCCG GAAGGTGAGT TGGGGGCGCC AATTTACAAC
AAGACCCTGA TTGCCGGAAT TGAGGACGGC AAGCGCAGTT TCTTCTATCA CACCCAGACG
ACACCGGATG GCGTTTCGCG GCTGATTACC TATCAACGGC TGTCGTCGAT GCCATTCCAC
CTGATCGTCG GCCTGGCGCA TGACGACTAT CTGCTGCCCT GGTATGAGCG ATTGCAGCAA
ACCGTCATCG CCCTTGTCAT TTTTGCGTTC GCCACCTTTG CCCTGAGCTT GTTGCTCCTG
GGCATGCTGT CCAGCTTGCG GCGGCAAGGC GAGCATGCCG TTGCGCTACT CAAGAATGCG
AGTGACGGTG TCCATATTCT CGACCGGCAT GGCGTCATCG TCGAAGCCAA CGACGCTTTC
TGCGCCCTGC TGGGTTATTC CCGGCAGGAG GTCATCGGCA TGGCCATCGG GCAATGGGAT
TCGTCAGTCA AGGATGTGGA TGTCGAGGCG ATGCTGGCCC AGCGCTTTCA GTCGCCCGTG
CCCGATCAGT TTGAAACACG CCACCGCCGG AAGGACGGCA GCGAGTTTCC GGCAGAGGTC
AGTTTCCAGC CGATGGTCAT CGAGGGCGTC GAGTTGCTCT ACGCCTCATC GCGGGATATC
AGTGACCGGA AGCGCGCAGA ATTGGTGCTG GCCCGTGAAC GTTCGATGTA CCGGACCTTG
ATCGACACGC TTCCCGACCT GATCTGGCTG AAGGATGCCG ATGGTGTCTA TCTCAGCTGC
AACCGCCGCT TCGAGCAGTT CTTCGGGACC AGCGAACAGG AAATTGTCGG CAAGACGGAC
TATGATTTCG TCAGCAAGGA ATTGGCTGAT TTCTTCCGGG AACATGATCG CAAGGCCATG
GAAAAGGATG GACCATCAAT TAACGAGGAG GAGGTGCCCT TCGCCTCGGA TGGTCACCGG
GAGCTGCTCG AAACGACGAA GATGTCGATG CGCGATGCCA GCGGGAAGCT GATCGGTGTG
CTGGGGATCG GGCATGACAT CACGGCCAAG CGACGTTCGG AGCTGGAACT GGATGGACAC
CGCCAGCACC TGCAGGAACT GGTCGACTCG CAGACCGCCG ATCTGATGGT GGCCAAGGAG
GTCGCCGAAA CAGCCAGTGT GGCCAAGAGC GCCTTCCTGG CCAACATGAG CCACGAAATT
CGCACGCCGA TGAATGCCAT CACCGGCATG GTGCATATCC TGCGCAACAT GGGGGTGACC
CCTCCGCAGT CTGAAAAGCT CGATATCATC GAAAACGCCA GCAAGCACCT GCTGGGAATC
ATCAACGATG TGCTCGACCT GTCGAAGATC GAGGCCGGAA AATTTACGCT GGAGGATGTG
CCGCTCAGTA TCCGCGCCCT GTTCGGCAAT GTAGCCTCGA TGCTCGGCCC GAAAGTGCGG
GAAAAGGGGC TGGTTTTGAA CATCGAAGCC GATGATGTGC CACGCAACTT GCGCGGTGAT
CCGACGCGAC TCCAACAGGC GCTGCTCAAT TTCGCCGGCA ACGCGCTGAA ATTCACCGAG
CGGGGGCATA TCACCCTGCG CGCCCGGATT CTGGAGGAGA CAGAGCTATC AGCCAACTTG
TGTATCGAGG TCGAAGATAC GGGAGTTGGC ATTGCGCCGG AAGCCTTGCC CAAACTGTTC
GGTGCGTTCG AGCAGGCCGA TAATTCGATG ACCCGCAAAT ACGGCGGGAC GGGGCTGGGC
CTGGCCATTA CCAAAAAGAT AGCGGAAGTG ATGGGCGGCA CGGCCGGCGT TAACAGCACG
CCGGGGGGAG GAAGTACCTT CTGGTTCACC GTGATCCTCG GTAAATCAGA TGAAATCGCC
GAGGTGCCCA GCCGTACCGC CATGACGGAG GCCGATGCGA TGCTGAGGCG CGATTGCGCC
CACCGGCGGA TTCTCTTGGC CGAAGACGAG CCGATCAATC GGGAAATTGC CCAAATGCTG
CTCGAAGCGG TCGATCTGGA CGTCGAAATG GCCGAGAACG GGGAGATTGC GGTGCGCATG
GCCCTGGCCA ACTGCTATGA CCTGATCCTG ATGGATATGC AGATGCCGGT GCTCGATGGT
TTGGCGGCCA CGCGGCGCAT CCGTGAACTG CCGGCCTGCG CAGCGGTGCC GATTCTTGCG
ATGACAGCCA ATGCCTTTGC CGAGGACAAG GCTCAATGCC TGGCGGCGGG GATGAACGAT
TTCATCGCCA AGCCGGTCGT TCCGGAGGTT CTTTACGATA CCTTGCTGAA GTGGCTGCGT
CGTCTGTAA
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| Protein sequence | MGVVFNTLSV AEALVFRRTL LAIVVAINCL AICVGAYTLY DSRQLYDRQA EAESRNLARA
LDENLAVSLG RVEVTLGSVV DRLEEELNRH ATLQEVSLAS FIKRAESHLG AHVRVRVSDE
SGMVILGGDV VPGTTTWGGR SFFRQLKEHP ETGTLINDPV LGYVTKVHLV PVAARYRYPD
GRFAGIVSVA VPVSYLSDQL AKLDYGPHGL AVLRDAKLNL ITRYPALNKP EGELGAPIYN
KTLIAGIEDG KRSFFYHTQT TPDGVSRLIT YQRLSSMPFH LIVGLAHDDY LLPWYERLQQ
TVIALVIFAF ATFALSLLLL GMLSSLRRQG EHAVALLKNA SDGVHILDRH GVIVEANDAF
CALLGYSRQE VIGMAIGQWD SSVKDVDVEA MLAQRFQSPV PDQFETRHRR KDGSEFPAEV
SFQPMVIEGV ELLYASSRDI SDRKRAELVL ARERSMYRTL IDTLPDLIWL KDADGVYLSC
NRRFEQFFGT SEQEIVGKTD YDFVSKELAD FFREHDRKAM EKDGPSINEE EVPFASDGHR
ELLETTKMSM RDASGKLIGV LGIGHDITAK RRSELELDGH RQHLQELVDS QTADLMVAKE
VAETASVAKS AFLANMSHEI RTPMNAITGM VHILRNMGVT PPQSEKLDII ENASKHLLGI
INDVLDLSKI EAGKFTLEDV PLSIRALFGN VASMLGPKVR EKGLVLNIEA DDVPRNLRGD
PTRLQQALLN FAGNALKFTE RGHITLRARI LEETELSANL CIEVEDTGVG IAPEALPKLF
GAFEQADNSM TRKYGGTGLG LAITKKIAEV MGGTAGVNST PGGGSTFWFT VILGKSDEIA
EVPSRTAMTE ADAMLRRDCA HRRILLAEDE PINREIAQML LEAVDLDVEM AENGEIAVRM
ALANCYDLIL MDMQMPVLDG LAATRRIREL PACAAVPILA MTANAFAEDK AQCLAAGMND
FIAKPVVPEV LYDTLLKWLR RL
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