| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3540 |
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| Symbol | |
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| ID | 3567618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3790830 |
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| End bp | 3791963 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637682013 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_286739 |
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| Protein GI | 71909152 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 0.229705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.129038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGA AGCTGGTGGT CAGGGGGGTA GTCGGGGTGC TGGGCGTTGT TTCCTCAAGT
TTCGTCATGG CTGAGACAGG CGTAAGCGAT AGCACGATTT TGGTCGGCCA GTCTGTTCCG
CTCAGCGGCC CGTCGCAGGA ACTGGGCAGC GAGATGAAAC TGGGGGTCCA GCTTTATTTT
GACCAGGTGA ATAGCCAGGG GGGCATCAAC GGTCGAAAGC TGGAACTGAA GGTATTGGAT
GATGGCTATG AGCCGGAACG CACCGCCGCC AATACGCGTC AGCTGATCGG AAAAGAGGGC
GTATTTTCCT TGCTTGGTTT TGTCGGAACA CCGACCAGTG TCGCAGCACT GCAGGTTTCG
AATCCAGCCA AAGTGCCTTT TGTTGGTGCT TTCACCGGCG CTGATGCCTT GCGCGTACCG
TTCAATCGGT ACGTATTCAA TATCCGGGCA AGCTACGCCG AGGAGTGCGA GCGGATTGTC
GAGCAGTTCA CTTCGCTGAA CGTCAAGCGC ATTGCCGTGT TTTTCCAGAA CGATGGCTTC
GGCAAGGCTG TTCTGAGTGG CGTCGAGCGA GCGATGGAAA AGCGAGGCTT GCAGGTAATC
AATAGCACCG CTATCGAACG GAATTCGCTG AACGTTGCTC CCGCGGCAAA AGCGATTGCC
GCAGTTCGCC CGGACATGGT GATCATGGCT GTCCCCTACA AGCCCAGCGC AGCCTTTATC
AACGCGATTC GCGGCGAAGG CGCCGCACCG CAGTTCTATA CGGTTTCGTT TGTCGGGCCG
CAAGCCCTGG CCAAGGAACT TGGGCCCAAT GGCGCGGGGG TGGGCATTTC CCAAGTGATG
CCTTTCCCTT GGTCGATCAA CGCGCCGATT GTTCGTGAGT ATCAGAAGTT GCTGCAGGGC
AAGGCTGAAC CCTCATACGT CAGCCTGGAA GGCTTCATCG CGGCGAAAGT TTTTGTCGAA
GGGGTGAAAC GCGCCGGCAA GGATCTGACC CGTGAAAAGC TCATCGGTGC CATGGAAGGG
ATGCACAGCT ACGATACCGG TGGTTATGCC GTCAGCTTTG GTCCAAACGA TCATAACGGC
TCGAAATTCG TCGAACTGAC GGTTCTGCGC CGTGATGGGA AAATCATGCG CTGA
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| Protein sequence | MNWKLVVRGV VGVLGVVSSS FVMAETGVSD STILVGQSVP LSGPSQELGS EMKLGVQLYF
DQVNSQGGIN GRKLELKVLD DGYEPERTAA NTRQLIGKEG VFSLLGFVGT PTSVAALQVS
NPAKVPFVGA FTGADALRVP FNRYVFNIRA SYAEECERIV EQFTSLNVKR IAVFFQNDGF
GKAVLSGVER AMEKRGLQVI NSTAIERNSL NVAPAAKAIA AVRPDMVIMA VPYKPSAAFI
NAIRGEGAAP QFYTVSFVGP QALAKELGPN GAGVGISQVM PFPWSINAPI VREYQKLLQG
KAEPSYVSLE GFIAAKVFVE GVKRAGKDLT REKLIGAMEG MHSYDTGGYA VSFGPNDHNG
SKFVELTVLR RDGKIMR
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