Gene Daro_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3538 
Symbol 
ID3567616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3789603 
End bp3790322 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID637682011 
Producthypothetical protein 
Protein accessionYP_286737 
Protein GI71909150 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value0.739224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0386409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCA CAACGCCACC TGAAACAAGC CACCGCATCG CCATTGCCGG TGCGGACGTT 
TCCTACCAAC TGCGGCGCAG CCAGCGGCGC ACGATAGGCT TGACCATCGA CCATCGCGGC
CTGCGGGTCG GTGCGCCGAC CCGGGCCCGG ATCGGCGATA TTGAAAAACT GATTCATCAG
CACGGCGACT GGGTGCTCGA CAAGCTGGCC GCCTGGCGCG ACCGCCCGGT TCCCGGCAAA
CAGGAAATCA CCGACGGCAC GATCATTTCC ATACTAGGCG AGCCGCTGAC CATTGCCCTG
ACGACTGTCG GGCGTTCCCG CTGGCAATTC GGCCCCGGCA CCCTCTACCT TCACCCGGTC
AGTACCGGTG CCATCAACGG CTTGCTTGAA AAGGCGCTGC GCGAGAAAGC GCGTGCTGTC
TTTGCCGAGC GCCTGCAAAT CCACGCCCCC CGGCTCGGTG TCGCGACGCC ACCCTTGCGG
CTTTCCTCTG CCCGAACCCG CTGGGGCAGC TGCAATCACC GAGGCGACAT CGCGCTGAAC
TGGCGGCTCG TTTTCATGCC GCTGCCGGTG GTCGATTACG TCGTTTGCCA TGAATTGGCG
CACCTCAAGG AAATGAACCA CAGCCCGCGC TTCTGGTCTG TGGTGGAACA ACTCTACCCG
GACTGGAAAA CCCGACGCCT TGAACTGCGT CAGTTGGCCC GGCAAATCCC GCACCTCTAA
 
Protein sequence
MPSTTPPETS HRIAIAGADV SYQLRRSQRR TIGLTIDHRG LRVGAPTRAR IGDIEKLIHQ 
HGDWVLDKLA AWRDRPVPGK QEITDGTIIS ILGEPLTIAL TTVGRSRWQF GPGTLYLHPV
STGAINGLLE KALREKARAV FAERLQIHAP RLGVATPPLR LSSARTRWGS CNHRGDIALN
WRLVFMPLPV VDYVVCHELA HLKEMNHSPR FWSVVEQLYP DWKTRRLELR QLARQIPHL