Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3521 |
Symbol | |
ID | 3567386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3771025 |
End bp | 3771624 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637681993 |
Product | BRO, N-terminal |
Protein accession | YP_286720 |
Protein GI | 71909133 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.000239324 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000343043 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAACCAA ACCACATGGC CACTCAAGTA TTCGCATTTC CATCCATTCG AGGAAGCTCC GCCGTCAACC TCGCTGTCCG CACAGTCGCG AAGGACGGCA GCACTTGGTT TGTCGCCAAG GATATTGCCG ATATTCTCGG CTATCGAGAC GCTGCCAACA TGGCACGAAA TCTTGATGAC GACGAAAAGG ATACTCACAA TCTGAGTACC CTTGGTGGCG AACAAGAGGC ATTGATCATC AGTGAGTCGG GGCTGTTCGC CGCCATCCTC AGGAGTCGCC GGAAAGAGGC GAAGGATTTC AGGAAGTGGG TCACATCCGT TGTTCTCCCC TCGATTCGCC AGCATGGCGG CTACGCCAAA GGCCAAGAAG ATTTGCCGGA GGCACTTGTC ATCAACCTGC ACCGAAAAAT CCGCGAGAAC GCCATGCCAG CCCTTCGCTA CTACGACAAA CTAACTGAGC ATGACCACTG GAAGTCGAAA GCACGATCTC AAGCCAGCAG CGACTGGGCA ACCCAGGAAG CTGCCTTGAA GTTTGACCTC CCGCTTTCAC TGATGGCTGG ACTTGTTGAT CAGGGGGTGA ATGCCTTGCT TTCCACGTAG
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Protein sequence | MEPNHMATQV FAFPSIRGSS AVNLAVRTVA KDGSTWFVAK DIADILGYRD AANMARNLDD DEKDTHNLST LGGEQEALII SESGLFAAIL RSRRKEAKDF RKWVTSVVLP SIRQHGGYAK GQEDLPEALV INLHRKIREN AMPALRYYDK LTEHDHWKSK ARSQASSDWA TQEAALKFDL PLSLMAGLVD QGVNALLST
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