Gene Daro_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3521 
Symbol 
ID3567386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3771025 
End bp3771624 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content54% 
IMG OID637681993 
ProductBRO, N-terminal 
Protein accessionYP_286720 
Protein GI71909133 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.000239324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000343043 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAACCAA ACCACATGGC CACTCAAGTA TTCGCATTTC CATCCATTCG AGGAAGCTCC 
GCCGTCAACC TCGCTGTCCG CACAGTCGCG AAGGACGGCA GCACTTGGTT TGTCGCCAAG
GATATTGCCG ATATTCTCGG CTATCGAGAC GCTGCCAACA TGGCACGAAA TCTTGATGAC
GACGAAAAGG ATACTCACAA TCTGAGTACC CTTGGTGGCG AACAAGAGGC ATTGATCATC
AGTGAGTCGG GGCTGTTCGC CGCCATCCTC AGGAGTCGCC GGAAAGAGGC GAAGGATTTC
AGGAAGTGGG TCACATCCGT TGTTCTCCCC TCGATTCGCC AGCATGGCGG CTACGCCAAA
GGCCAAGAAG ATTTGCCGGA GGCACTTGTC ATCAACCTGC ACCGAAAAAT CCGCGAGAAC
GCCATGCCAG CCCTTCGCTA CTACGACAAA CTAACTGAGC ATGACCACTG GAAGTCGAAA
GCACGATCTC AAGCCAGCAG CGACTGGGCA ACCCAGGAAG CTGCCTTGAA GTTTGACCTC
CCGCTTTCAC TGATGGCTGG ACTTGTTGAT CAGGGGGTGA ATGCCTTGCT TTCCACGTAG
 
Protein sequence
MEPNHMATQV FAFPSIRGSS AVNLAVRTVA KDGSTWFVAK DIADILGYRD AANMARNLDD 
DEKDTHNLST LGGEQEALII SESGLFAAIL RSRRKEAKDF RKWVTSVVLP SIRQHGGYAK
GQEDLPEALV INLHRKIREN AMPALRYYDK LTEHDHWKSK ARSQASSDWA TQEAALKFDL
PLSLMAGLVD QGVNALLST