Gene Daro_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3519 
Symbol 
ID3567384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3769432 
End bp3769920 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID637681991 
Productthioesterase superfamily protein 
Protein accessionYP_286718 
Protein GI71909131 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.0788817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00126727 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTAC CCAAACACCA ACTCGCCATG ACCGTGTTGA TGACACCAGA CATGGCCAAT 
TTCTCCGGCA ATGTTCACGG CGGCACCATC CTCAAGTTGC TCGACCAAGT CGCCTACGCC
TGCGCCAGCC GCTACGCCAG CCAATACGTC GTCACCCTGT CGGTCGACCA GGTCATGTTC
CGCCAACCCA TCCACGTTGG CGAACTGGTT ACCTTCCTCG CCTCGGTGAA TTACACCGGC
AACACCTCGA TGGAAATCGG CGTCAAAGTC CTGACCGAAA GCATCCGCGA CCAGGTCGTC
CGCCATGCCA ATAGCTGCTT CTTCACGATG GTCGCGGTCG ATGACAACGG CCAAACCACG
CCGGTCCCGC CGCTTGCCCC CAAGACCCCG GACGAAATCC GCCGCTACCA GGCCGCCCAA
CTACGCCGCG AACTGCGCAA GGAATTCGAA ACGCGGCAGA AGCAGTTGAA CGCTGGCATC
TCCATCTGA
 
Protein sequence
MDLPKHQLAM TVLMTPDMAN FSGNVHGGTI LKLLDQVAYA CASRYASQYV VTLSVDQVMF 
RQPIHVGELV TFLASVNYTG NTSMEIGVKV LTESIRDQVV RHANSCFFTM VAVDDNGQTT
PVPPLAPKTP DEIRRYQAAQ LRRELRKEFE TRQKQLNAGI SI