| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3515 |
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| Symbol | |
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| ID | 3567380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3764048 |
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| End bp | 3766561 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681987 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_286714 |
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| Protein GI | 71909127 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.0949945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00218526 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGCTCA ATCGACGCGA TTTCATCAAA GCCAACGCAG CAGCGGCGGC GATTTCTGCG
GCAGGTTTGT CCGTGCCGGG TGCAGCCGTG GCCCAGGGCA AGGACGAGAT TCGCTGGGAC
AAGGCAGCCT GCCGCTTTTG CGGCACCGGT TGCGGTGTTC TGGTTGGCAC CCAGGACGGG
CGCGTCGTCG CCACCCAGGG TGACCCTGAC GCCCCGGTCA ATCGTGGCCT GAACTGCATC
AAGGGCTACT TCCTGTCCAA GATCATGTAC GGTGCCGACC GCCTGAAGAC GCCGATGTTG
CGCATGAAGG ACGGCAAGTA CGACAAGAAC GGCGAATTTA CGCCGATTTC CTGGACCAAG
GCTTTCGACA TCATGGAAGA AAAGGCCAAG GCCACCATGA AGGCCAAGGG GCCGAATGGT
CTGGCCATGT TCGGTTCTGG CCAATGGACC ATCTGGGAAG GCTATGCTGC TTCCAAGCTG
ATGAAGGCCG GCTTCCGGAC CAACAACCTC GATCCCAACG CACGCCACTG CATGGCCTCG
GCCGTTGCCG GCTTCATGCG CACTTTCGGT ATCGATGAGC CGATGGGCTG CTACGACGAC
ATCGAGCATG CCGATGCCTT CGTGCTGTGG GGCTCGAACA TGGCCGAAAT GCACCCGATC
CTGTGGACCC GCATTACCGA CCGCAAGCTG TCGAACAAGG GGGTCAAGGT CGCTGTGCTG
TCGACTTTCG AGCACCGCTC CTACGAGCTG GCCGACATCC CGATGATCTT CACGCCGCAG
ACCGATTTGG CGATCCTCAA TTACATCGCC AACTACATCA TCCAGAACGG CAAGGTGAAT
CAGGCGTTTG TCGACAAGAA CGTCAATTTC AAGAAAAGCG CTACCGACAT CGGTTACGGC
CTGCGTCCGA CCCATGCGCT GGAAAAGAAT GCAACGAGCA ATGGTTATCC GGATGCGGAC
GGCAAGCCGA AGGGTGATAC CGGCAAGTCC GACCCGATCA CCTTCGACGA ATTCAAGAAG
TTCGTTTCCG AGTACACCGT CGAGAAGGTT TCCAAGCTGT CCGGTGTGGC CGAGAAAGAT
CTCAAGGCGC TGGCCGAGTT GTATGCCGAC CCCAAGGTCA AGGTCATCTC CTTCTGGACC
ATGGGTTTCA ACCAGCATAC CCGTGGCACC TGGGCGAACA ATCTCTGCTA CAACATCCAC
CTGCTGACCG GCAAGATTTC CGAGCCGGGC AACAGTCCGT TCTCGCTGAC CGGCCAGCCC
TCCGCTTGCG GCACGGCACG CGAAGTCGGT ACTTTCTCGC ATCGCCTGCC GGCCGACATG
GTCGTCACCA ATCCGGAACA CCGCAAGCAT ACGGAAGAGC TGTGGGGCCT GCCGGAAGGC
ACGATTCCCG ACAAGGTCGG CTACCACGCC GTGGCCATGG CCCGGGCGCT GAAGGACGGC
AAGGTCAATT TCTACTGGCA GCAGTGCAAC AACAACATGC AGGCCGGCCC GAACATCAAT
GAAGAGCTCT ATCCGGGCTG GCGCAAGCCG GAGAACTTCA TTGTCGTGTC CGATCCGTAC
CCGACGGTCT CGGCGATGGC CGCCGACCTT ATCCTGCCGA CCGCCATGTG GGTCGAAAAG
GAAGGTGCTT ACGGCAATGC CGAGCGGCGT ACCCAGTTCT GGCGTCAGCA AGTCAAGGCG
CCAGGTGAGG CTCGCTCCGA TCTGTGGCAG CTGATGGAAT TCTCCAAGCG CTTCAAGGTC
GAGGAAGTCT GGCCGGCCGA ACTGGTCGCC AAGGCGCCGA AGCTCAAGGG CAAGACCTTG
TTCGATGTGC TCTACGCCAA CGGCGTGGTG AACAAGTACA AGCTGAATGA AACGGCTGCC
GGCTTCGATA ACGACGACTC CAAGCTGATC GGTTTTTATA TTCAGAAGGG GCTGTTCGAG
GAGTACGCCT CGTTTGGTCG CGGCCATGGT CACGATCTGG CACCGTTCGA CTCCTATCAC
CAGGCTCGCG GCCTGCGCTG GCCGGTGGTT GGCGGCAAGG AAACGCTGTG GCGCTTCCGT
GAAGGTTATG ACCCGTACGT CAAGAAGGGC GAGGGCGTGA AGTTCTACGG CCACAAGGAT
GGCAAGGCAG TGATCTTTGC GCTGCCCTAT CAGCCGCCCG CCGAGTCGCC GGACAAGGAA
TTCGACATGT GGTTGTCTAC TGGTCGCGTC CTTGAGCATT GGCATACCGG TACGATGACC
CGTCGTGTGC CGGAGCTCTA TAAGGCCTTC CCGGATGCCG TTGTCTTCAT GCACCCGGAT
GACGCCAAGG CGCGTGGTTT GCAGCGCGGC ATGGAGGTCA AGGTGGCGTC GCGGCGCGGT
GAAATCCAGT TGCGTGTTGA GACGCGTGGC CGTAACAAGC CACCGCGCGG CCTAGTTTTC
ATCCCCTTCT TTGACGCTGG CCGTCTGGTC AATAAATTGA CGCTGGATGC GACTTGCCCG
ATTTCCAAGG AAACGGACTA CAAGAAGTGT GCCGTCAAGG TGACCAAGGT CTGA
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| Protein sequence | MKLNRRDFIK ANAAAAAISA AGLSVPGAAV AQGKDEIRWD KAACRFCGTG CGVLVGTQDG
RVVATQGDPD APVNRGLNCI KGYFLSKIMY GADRLKTPML RMKDGKYDKN GEFTPISWTK
AFDIMEEKAK ATMKAKGPNG LAMFGSGQWT IWEGYAASKL MKAGFRTNNL DPNARHCMAS
AVAGFMRTFG IDEPMGCYDD IEHADAFVLW GSNMAEMHPI LWTRITDRKL SNKGVKVAVL
STFEHRSYEL ADIPMIFTPQ TDLAILNYIA NYIIQNGKVN QAFVDKNVNF KKSATDIGYG
LRPTHALEKN ATSNGYPDAD GKPKGDTGKS DPITFDEFKK FVSEYTVEKV SKLSGVAEKD
LKALAELYAD PKVKVISFWT MGFNQHTRGT WANNLCYNIH LLTGKISEPG NSPFSLTGQP
SACGTAREVG TFSHRLPADM VVTNPEHRKH TEELWGLPEG TIPDKVGYHA VAMARALKDG
KVNFYWQQCN NNMQAGPNIN EELYPGWRKP ENFIVVSDPY PTVSAMAADL ILPTAMWVEK
EGAYGNAERR TQFWRQQVKA PGEARSDLWQ LMEFSKRFKV EEVWPAELVA KAPKLKGKTL
FDVLYANGVV NKYKLNETAA GFDNDDSKLI GFYIQKGLFE EYASFGRGHG HDLAPFDSYH
QARGLRWPVV GGKETLWRFR EGYDPYVKKG EGVKFYGHKD GKAVIFALPY QPPAESPDKE
FDMWLSTGRV LEHWHTGTMT RRVPELYKAF PDAVVFMHPD DAKARGLQRG MEVKVASRRG
EIQLRVETRG RNKPPRGLVF IPFFDAGRLV NKLTLDATCP ISKETDYKKC AVKVTKV
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