| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3502 |
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| Symbol | |
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| ID | 3567770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3751419 |
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| End bp | 3752789 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681974 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_286701 |
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| Protein GI | 71909114 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 0.464262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.138941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGT TGCTCTCGCA AGTAGCCCAG GCAGTGCAGG GGCGCCTGAT TGGTGCCGAC
GTGTCGATTG ACGGCGTATC GACCGATACG CGGGCGATTA CCGAAGGTCA ATTGTTCATC
GCGCTGGCCG GTGAGAATTT CGACGCCCAC GACTTTTTGG CTCCGGCCAT TGCCGCTGGT
GCAACGGCGT TGATGGTGGC TGATGAAAGC AAGGTGCCGA CCGGGGTTCC CGCCGTCGTC
GTTGACGACA CGCGGCTGGC CTTGGGGCGT TTGGCCGCCG CCTGGCGCGC GAAATTCAAT
CTGCCGGTGA TCGCCGTGAC AGGGTCGAAT GGCAAGACGA CGACCAAGGA AATGGTGGCC
GCTATTCTGA AGGCCGCCTT CGGTGCTGCG GTGCTGTCAA CCCGGGGTAA TCTGAACAAT
GACATCGGTC TGCCGCTGAC CTTGCTCGGC CTGCGCGCCT CGCACCGCGC CGCGGTGATC
GAGATGGGCA TGAATCACCC CGGTGAGATC GGCTATCTGG CGCCGATCGG GGCTCCGACC
GTGGCCCTGA TCACCAATGC CCAGCGGGCG CACCTCGAAG GCATGGGCGA TCTGGACGAA
GTCGCCCGCG AGAAGGGTTC CATCTTCCTC GGTCTGCCGG CGAATGGCGT GGCGGTGATC
AATGCCGACG ATGCCTATGC CGGACTGTGG CGTGGCATGG CCGGCGGCCG TCCGGTACGG
ACTTTTGGTA TCGATAATGC GGCAGACGTC AGCGCCAAGG TTCGTCAGCA CGGCCTTGAG
ATCGGCCTCG AGCTATCAGC GCCGGAAGGT GACGCCGCGC TGATCCTGTC GATTCCGGGG
CGTCATAACG CCCGCAATGC CGTGGCAGCT GCCGCTGCGT GTCTCGCCGC CGGTATTCCG
ATGGTTGCCG TGATCGCCGG CCTGGAAGCC TTCTCGGGGG TCAAAGGGCG CTTGCAGCGC
CGTACCGGCA AGCAGGGCGC CGAGATCCTC GATGACACCT ACAACGCCAA TCCTGATTCG
GTTCGGGCTG GTATCGATGT GCTGGCCGCG ACCATCGGCC GCAAACTGCT CGTCCTCGGC
GACATGGGGG AAATCGGCGA AGCCAGCGGC CAGTATCACG ACGAAATCGG CGGCTACGCC
AAGAGCCAGG GCATCGACCG CCTGTTCGCG CTGGGCGAGG CAGCGCAGCA GGCTGTGCGT
AACTTCGGCG AAGGGGCCAA GCATTACTGC AACGTCGACA AGCTGATTGC TGCTGTCGAC
AAGGAATTGG GCCCGGAAAC CACCGTGTTG GTGAAGGGCT CGCGCTTCAT GAAAATGGAA
CGGGTGGCCG ATGCTCTGGC AGCACCCGTC GCTCCCGAGG AGAAACACTG A
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| Protein sequence | MNWLLSQVAQ AVQGRLIGAD VSIDGVSTDT RAITEGQLFI ALAGENFDAH DFLAPAIAAG
ATALMVADES KVPTGVPAVV VDDTRLALGR LAAAWRAKFN LPVIAVTGSN GKTTTKEMVA
AILKAAFGAA VLSTRGNLNN DIGLPLTLLG LRASHRAAVI EMGMNHPGEI GYLAPIGAPT
VALITNAQRA HLEGMGDLDE VAREKGSIFL GLPANGVAVI NADDAYAGLW RGMAGGRPVR
TFGIDNAADV SAKVRQHGLE IGLELSAPEG DAALILSIPG RHNARNAVAA AAACLAAGIP
MVAVIAGLEA FSGVKGRLQR RTGKQGAEIL DDTYNANPDS VRAGIDVLAA TIGRKLLVLG
DMGEIGEASG QYHDEIGGYA KSQGIDRLFA LGEAAQQAVR NFGEGAKHYC NVDKLIAAVD
KELGPETTVL VKGSRFMKME RVADALAAPV APEEKH
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