| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3500 |
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| Symbol | |
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| ID | 3567768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3748963 |
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| End bp | 3750315 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637681972 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_286699 |
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| Protein GI | 71909112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.0719241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.127337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCA AGGGCAAACG CGTTCTGGTC GTCGGACTCG GTGAGTCCGG ACTGGCGATG
GCCAAGTGGC TGCATCGCCA GGGCGCGCTC GTCCGCGTTG CCGACTCGCG CGACAACCCG
CCGAATATTG ACGCGCTGCA GCGCGTCGCA CCAGGGGCTG AACTGGTGGC CGGTGCCTTT
GCCGAGGCCA CTTTCGCCGG TGCCGATTTC GTCGCGCTGT CGCCGGGCGT GCCCAAGGCG
ACGCCAGAGA TTGCCGCGCT TGAGATACCG TTGATTTCCG AAATCGAACT GTTCGCTGAC
GGCGTGCGCG AACAGGTGCC GAATTCACAA ATCATCGCCA TCACCGGCAG CAACGGCAAG
ACCACGACCA CGGCGCTGAC CGCCCATCTG CTCAACGGTG CTGGCGTACC GGCTATCGCC
TGCGGCAACA TTTCTCCGTC GGCGCTTGAT GCGCTGATGG ACGCCCAGGA TGCCGGCGCT
TTGCCGCAAG TCTGGGTTGT CGAACTGTCC AGCTTCCAGC TCGAAACGAC GCATCACCTG
AATGCCGCTG CCGCGACTGT CCTCAACGTC TCGGAAGATC ATCTCGACCG CTACGAGGGC
AGCCTGGCCA ACTACGCCGC CGCCAAGTCA CGAGTTTTTC AGGGCAAGGG CGTGATGGTA
CTGAACCGTG ATGACGACTG GTCGATGGCC AATGGCCGTT GCGGCCGCAA GATGGTGACT
TTTGGCCTGA ATGCCGCACC GCGTGGTGTC GATTACGGCT ACGCCGATGG CGCTATCTGG
CGCGGCAAGG ACAAGCTGGT CGCGATCGAT GCCCTGAAGC TGTCCGGTTT GCACAATGCC
GCCAATGCCA TGGCCGCACT GGCGCTGTGT GAGGCCATCG GCGTCGATCC GCTCCGCCTG
ATTGAGCCAC TGAAGGGCTT CTCCGGCCTG CCGCACCGGG TCGAAACTGT CGCTGAAATC
GGCGGCGTGC TCTACGTTGA TGACTCCAAG GGTACCAATG TCGGCGCCAC CCTGGCGGCC
ATCGAAGGCA TGGGCCGCAA AGTTGCGATC GTCCTCGGCG GCGACGGCAA GGGGCAGGAT
TTCTCGCCGC TCAAGCCAGC GCTGGAAAAG CACGGTCGTG CTGTGGCGCT GATCGGCCGT
GATGCTGCCG CCATCGGCAT GGCGCTCGAA GGCAGCGGCG TGCCAACCCG GATTCTGGGC
GATATGGAAG CTGCCGTGCT CTGGCTGGCG GCGCAAGCCC AAGCTGGCGA CTGCGTGCTG
CTCTCGCCGG CCTGCGCCAG TCTCGACATG TACCGCAACT ACGCGCATCG CGCCCAGGCC
TTCATCGACG CGGTGGAGGG GCTGAAATCA TGA
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| Protein sequence | MELKGKRVLV VGLGESGLAM AKWLHRQGAL VRVADSRDNP PNIDALQRVA PGAELVAGAF
AEATFAGADF VALSPGVPKA TPEIAALEIP LISEIELFAD GVREQVPNSQ IIAITGSNGK
TTTTALTAHL LNGAGVPAIA CGNISPSALD ALMDAQDAGA LPQVWVVELS SFQLETTHHL
NAAAATVLNV SEDHLDRYEG SLANYAAAKS RVFQGKGVMV LNRDDDWSMA NGRCGRKMVT
FGLNAAPRGV DYGYADGAIW RGKDKLVAID ALKLSGLHNA ANAMAALALC EAIGVDPLRL
IEPLKGFSGL PHRVETVAEI GGVLYVDDSK GTNVGATLAA IEGMGRKVAI VLGGDGKGQD
FSPLKPALEK HGRAVALIGR DAAAIGMALE GSGVPTRILG DMEAAVLWLA AQAQAGDCVL
LSPACASLDM YRNYAHRAQA FIDAVEGLKS
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