| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3492 |
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| Symbol | lpxC |
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| ID | 3566952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3740240 |
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| End bp | 3741157 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637681964 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_286691 |
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| Protein GI | 71909104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 0.399002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.482784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC AACGCACGTT GAAGACCGTC ATCCGCGCCT CGGGCGTTGG GCTGCATGGC
GGCGTCAAGG TCAATATGAC CCTGCGCCCG GCTGCCCCGG ATACCGGCAT CGTCTTCCGT
CGCGTCGATC TGCCCGAGCC GGTGGATATT CCCGCCAAGG CCTTCATGGT CGGCGATACG
CGCATGTGCT CCTGTCTCGA AAAGGACGGG GTGAAGGTTG GTACCATCGA ACACCTGATG
TCGGCCCTCG CCGGTCTTGG CATCGACAAT GTCTGGGTCG ATCTGGATGC GCCCGAAGTG
CCCATCCTCG ACGGTTCGGC TGCGCCGTTC GTCTTCCTGA TCCAGTCCGC TGGCATCGAG
GAGCAGAACG CCGCCAAGAA ATTCATTCGC GTCACCAAAA CCATCGAAGT CAGGGATGGT
GACAAGTGGG CGCGCTTCGA GCCCTACGAC GGTTATCGTC TGGCTTTCTC CATCGTCTTC
AATCATCCGG CCATCGACAA GTCAGCCCAA AAGGCTGAAA TCGACTTCGC CGAGCAGTCC
TACGTCCGTG AAGTGGCCCG TGCCCGCACC TTCGGCTTCA TGCAGGAAGT CGAATACCTG
CGTGAAAACG GCCTTGCCCT CGGTGGCGGT CTGGAAAACG CCATCGTGCT CGACGAGTTC
CGTGTCCTCA ACCAGGATGG CCTGCGTTAT GGCGACGAAT TCGTCAAACA CAAGATTCTC
GATGCGATCG GTGACCTCTA TCTGCTTGGC CATCCGCTAC TGGCCGCCTA TTCGTCACAC
AAGGGTGGTC ACGCGCTGAA CAACCAGTTG GCCCGTGCCC TGCTCGAACA GCAGTCATCG
TGGGAAATCG CCACCTTCGA GCAGGCGGAG CACGCGCCGA GCGGCGTGAC TCGCTGGCTC
GCCCAAGCGG CAGCCTGA
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| Protein sequence | MLKQRTLKTV IRASGVGLHG GVKVNMTLRP AAPDTGIVFR RVDLPEPVDI PAKAFMVGDT
RMCSCLEKDG VKVGTIEHLM SALAGLGIDN VWVDLDAPEV PILDGSAAPF VFLIQSAGIE
EQNAAKKFIR VTKTIEVRDG DKWARFEPYD GYRLAFSIVF NHPAIDKSAQ KAEIDFAEQS
YVREVARART FGFMQEVEYL RENGLALGGG LENAIVLDEF RVLNQDGLRY GDEFVKHKIL
DAIGDLYLLG HPLLAAYSSH KGGHALNNQL ARALLEQQSS WEIATFEQAE HAPSGVTRWL
AQAAA
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