Gene Daro_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3486 
Symbol 
ID3566946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3733463 
End bp3734590 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content64% 
IMG OID637681958 
Producthypothetical protein 
Protein accessionYP_286685 
Protein GI71909098 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.12464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTC GCCGCGACCC GGCCAGAAAT ACACTGGCCA TCCTCTGCAT CCTCGGGCTG 
ATCGGCCTGT CGGTCTGGGT GTTGCTGCCT TTTCTGGCGG CGACGGTGTG GGCGGTGATG
ATAGTCGTGG CGACCTGGCC TTTGTTCAAG TCGCTGGAGT CGCGTCTGGG TAATCGACGG
GCGCCGGCGG TGGTGCTGAT GTCGGTGGCC ATGCTCCTGT TGCTGGTGCT GCCGCTTTGG
CTGGCGGTCG ATACCATCAT TGAGCATTCC GGGCAGCTGG CCGCCGCCGG CAAATCGATG
GCGGCCAACG GTCTGCCGCC ACCACCCGCC TGGGTCAAAA CGCTGCCGCT GGTCGGTGAC
CGCGTGGCAA GCGCTTGGGC GCAACTGGAT GCGGCCGGAA CGAGCGGTAT TGTTACGAAA
GTGACGCCTT ACGCCGCCGA TACGGGTAAG TGGGTGCTCG CTCAGGCCGG TAGTGTTGGT
GGCATGCTGA TCCAGTTCCT GCTGGTCGTG ACCATTGCGG CCATCCTCTA TTCCGGTGGC
GAAACAGGGG CGCGCACGGC CCGTCGTTTC GGCCGTCGTC TGGCCGGCGA CCGGGGCGAA
AACTCGATCA TTCTGGCCGG GCAGGCGATT CGTGGCGTGG CGCTGGGGGT TGGGGTGACC
GCCATCGTCC AGACCGTGCT TGGCGGCGTC GGGCTGGCTG TGGCTGGCGT GCCGTTCGCC
TCATTGCTAT CGGCCGTCAT GCTGATGCTG TGCATCGCCC AGATTGGCCC GATGCTGGTG
CTGCTGCCGG CAGTGGGTTG GATGTACTGG ATGGGGGATA GTGGCTGGGC GACCTTACTG
CTGGTCTGGA GCCTGATCGT CGGCAGCCTC GATAACTTCC TGCGGCCGAT GCTGATCAAG
CGTGGTGCCG ACTTGCCGCT GCTGCTGATT TTTGCCGGGG TGATCGGCGG TATGCTGAGC
TTTGGCCTGA TCGGCATCTT CGTCGGCCCG GTCGTGCTGG CCGTCACCTA TACGCTGACC
CTGGCCTGGA TCGAGGATGC GCTGGGCAAG GACGAGCCTG AATCTATCCC CGAACTGCTG
CCGTCAGAGC TTCCTGAGCC GGATCATCCG GAACCATCCG CCGGCTAG
 
Protein sequence
MDIRRDPARN TLAILCILGL IGLSVWVLLP FLAATVWAVM IVVATWPLFK SLESRLGNRR 
APAVVLMSVA MLLLLVLPLW LAVDTIIEHS GQLAAAGKSM AANGLPPPPA WVKTLPLVGD
RVASAWAQLD AAGTSGIVTK VTPYAADTGK WVLAQAGSVG GMLIQFLLVV TIAAILYSGG
ETGARTARRF GRRLAGDRGE NSIILAGQAI RGVALGVGVT AIVQTVLGGV GLAVAGVPFA
SLLSAVMLML CIAQIGPMLV LLPAVGWMYW MGDSGWATLL LVWSLIVGSL DNFLRPMLIK
RGADLPLLLI FAGVIGGMLS FGLIGIFVGP VVLAVTYTLT LAWIEDALGK DEPESIPELL
PSELPEPDHP EPSAG