Gene Daro_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3472 
SymbolobgE 
ID3567340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3719917 
End bp3721008 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content60% 
IMG OID637681944 
ProductGTPase ObgE 
Protein accessionYP_286671 
Protein GI71909084 
COG category[R] General function prediction only 
COG ID[COG0536] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.004996 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.428622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA TCGATGAAGC CAAGATTTAT ATAAAGGCTG GTGACGGCGG CAATGGCGCC 
GCAACTTTCC GCCGCGAAAA ATATATTCCC ATGGGCGGCC CGAACGGCGG CGATGGCGGC
CGTGGCGGCA GCATCTACGC CGTGGCCGAT CGCAACATCA ACACGCTGGT CGACTATCGC
TACACCCGGA AATTCATCGG AAAGCGCGGC GAAAATGGTG GTGGCGCCGA TCAGTATGGC
GCCGGCGGCG ACGACATCAT CCTGCGCATG CCGGTCGGTA CGGTCATCTA CAACCTGAAT
ACCGAAGAAA TCATCGCCGA CCTGTCCGAA CATGACCAGA AAGTCATGAT CGCCAAAGGC
GGCAAGGGTG GCCTCGGCAA CATCCACTTC AAATCCTCGA CGAACCGCGC ACCGCGCCAG
AAAACCAACG GCGAACAAGG CGAGGAGCTC GAACTGCGCC TCGAACTGCG CGTACTGGCC
GACGTCGGCC TACTCGGCCT GCCCAATGCC GGCAAGAGCA CGTTGATCCG CGCCATTTCT
TCGGCTCGCC CCAAAGTTGC CGACTACCCC TTCACCACCC TGCACCCGAA TCTGGGCGTC
GTCCGTGTTG ATGACGAAAA GAGCTTCGTC ATGGCCGACG TCCCTGGCCT GATCGAAGGT
GCCGCCGATG GCGCCGGCCT CGGCATTCGC TTCCTCAAGC ACCTGCAGCG GACACGCATT
CTTTTGCACC TCGTCGATAT TGCCCCCATT GACCCGGATT CCGACCCGGT GCGCGACGCC
AAGGCCATTG TCGGCGAATT GATCAAGCAC GACCCGGATC TGGCCAACAA GCCTCGCTGG
CTGGTCCTCA ACAAACTTGA CCTGATCCCG GAGGAGGACC GCGAAGCGGC GGTCAAGAAT
TTCATCAAGG CCTACAAGAA GGCCACCAAA TACGACGGCC CGGTCTTTCC GATTGCCGCC
ATCAACGGCG AGGGCACCAA GCCGCTGATA TATGCGATCA GCGAAGCGCT CGAACAGATG
GCCCGCCCCG AAATCGGCGA CCTGGACGAC AACGACGAAG ACAGCGACGA AATCATCCGC
GACACCGAAT AA
 
Protein sequence
MKFIDEAKIY IKAGDGGNGA ATFRREKYIP MGGPNGGDGG RGGSIYAVAD RNINTLVDYR 
YTRKFIGKRG ENGGGADQYG AGGDDIILRM PVGTVIYNLN TEEIIADLSE HDQKVMIAKG
GKGGLGNIHF KSSTNRAPRQ KTNGEQGEEL ELRLELRVLA DVGLLGLPNA GKSTLIRAIS
SARPKVADYP FTTLHPNLGV VRVDDEKSFV MADVPGLIEG AADGAGLGIR FLKHLQRTRI
LLHLVDIAPI DPDSDPVRDA KAIVGELIKH DPDLANKPRW LVLNKLDLIP EEDREAAVKN
FIKAYKKATK YDGPVFPIAA INGEGTKPLI YAISEALEQM ARPEIGDLDD NDEDSDEIIR
DTE