Gene Daro_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3463 
Symbol 
ID3567331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3713004 
End bp3714212 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID637681935 
Producthypothetical protein 
Protein accessionYP_286662 
Protein GI71909075 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG CTGACACCCT CCGCTTTGCC CGCGATGCCG CGACCGGTTA TCCGATGCGC 
ACAACGCTGT CGATCCTCGC CATGTCGATC GGGGTTGCCG CGGTCGTCAT CCTGACCGCG
CTGGGCGATG GTGCGCGGCG CTACGTCGTT GGCCAGTTTT CATCGCTCGG CACCAATCTG
GTCATCGTCC TTCCCGGCCG TTCCGGCACC GGTGGTTTCA ATCCAGCCAA TGCCATAACC
TCGACGCCGC GCGATCTGAC GGTCGACGAT GCAGCAAGCC TGAAGCGCCT GCCCGGCGCC
CGCCGAGTCG CGCCGCTCGC CGTCGGCACA TCGGAAATCA ACTACGGCGG CAAGCTGCGC
GAAGTCATGG TCGCCGGCTC AACAGCCGAA TTCATCCCCA TCCGCAATTT TGAACTGGCA
CAAGGCAAGG CACTGCCGGA AGAGGACTGG AATCGAGGCT CATCGGTCGC CATCATCGGC
GCCAAGATTC GCGACGAACT ATTCGCCAGC GAAGCAGCCC TCGGCCAGCT GATCCGCCTG
GGTGACCGCC GCCTGCGTAT CATCGGCGTG CTCAAATCGA CCGGCCAGGG GCTGGGCATG
AATACCGATG AACTGGTCAT CGTCCCCGTG TCGCTGGCCC AGTCGATGTT CAACAGCAAC
ACCCTGTTCC GCATCATGAT CGAGGCCAAT ACCCGCGACG CCATCCCGGC AACCAAAGAA
CAGGTGCTGG AACTGCTCAA GCAGCGCCAC CGCGGCGAGG AGGACGTCAC CGTCATCACG
CAGGATGCCG TGCTCGCCAC CTTCGACAAG CTGCTCGGTG CGCTGACCCT CGGTGTTGCC
GGCATCGCCG CAATCAGCCT GGCCGTGGCC GGCATTCTGG TCATGAACGT CATGCTCGTC
GCCGTCACTC AGCGCACCGG TGAAATCGGC CTGCTCAAGG CGCTTGGCGC TACTGCCAGG
ACCATCCGTT TCGCCTTTCT GGCCGAAGCG GCGATGCTTT CCGCCGTCGG CGCGCTTGTC
GGCTACCTGC TCGGCCAGCT CGGCGCCTTC GCGCTGCGCC AGTTTTTCCC GGTCTTTCCG
GCCTATCCGC CGGACTGGGC CGTCATCGCC GGCCTGAGCA CGGCGCTCGC CACCGGCCTG
CTCTTTGGCG TCATGCCGGC CCGTCGTGCC GCCCAACTCG ACCCGGTGCA AGCCCTGATG
AAGCGCTGA
 
Protein sequence
MRLADTLRFA RDAATGYPMR TTLSILAMSI GVAAVVILTA LGDGARRYVV GQFSSLGTNL 
VIVLPGRSGT GGFNPANAIT STPRDLTVDD AASLKRLPGA RRVAPLAVGT SEINYGGKLR
EVMVAGSTAE FIPIRNFELA QGKALPEEDW NRGSSVAIIG AKIRDELFAS EAALGQLIRL
GDRRLRIIGV LKSTGQGLGM NTDELVIVPV SLAQSMFNSN TLFRIMIEAN TRDAIPATKE
QVLELLKQRH RGEEDVTVIT QDAVLATFDK LLGALTLGVA GIAAISLAVA GILVMNVMLV
AVTQRTGEIG LLKALGATAR TIRFAFLAEA AMLSAVGALV GYLLGQLGAF ALRQFFPVFP
AYPPDWAVIA GLSTALATGL LFGVMPARRA AQLDPVQALM KR