Gene Daro_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3453 
Symbol 
ID3567858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3702578 
End bp3703393 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID637681925 
Productpeptidase M23B 
Protein accessionYP_286652 
Protein GI71909065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT CTCACTTCGC CCTGGCCTTG CTCATCAGCC ACGCCACCAT GGCCATCGCC 
TTGCCGAAAA ACTCGGCGGT CCCCGGCGGC GTTGCCGTCA TCGACCTCGG CCCGGCCAGC
CAGACAACGC CGACCGCCCG CTGGGGAGAA CAGCCCATCG CGGTCGTTCG CGACAATGGC
CGCTGGTTCG CCCTGCTCGG CATTCCGCTC GACACCCTGC CCGGCGATCT GGAAATCAGG
ATTTCAAGTG GGGCAGCGAC AACGACCAGG CAGGTCGCCG TGCAGATCAA GAATTACCCC
GAACAGCGCC TGACCATCAA GGACAAACGC AAGGTCGAAC CGAACGCCGA AGACCTCGCC
CGCATTGAGC GCGAACAAAA GATCACCGAG GCGATCAAGA AACATTTTGC CAATTCCGCA
CCGGCCACCG ATTTCACCCT GCCAGCCAGC GGGCCGCTGT CTTCACGTTT CGGCCTGCGC
CGAATCTTCA ACGGCCAGCC GCGCAACCCG CACGCAGGAC TTGATGTTGC CGTTGGCACG
GGCACACCAG TCAAGGCACC GGCCGATGGG ATCATCGCAA ATACCGGCGA TTATTTCTTC
AACGGCAACA CCGTCTTCAT TGACCATGGC CAGGGCCTGA TTACCGCTTA CATGCACCTA
TCGCGGGTCG ACGTTCGCGC CGGACAGACG GTCAAAAAAG GGGAAGCGCT CGGCGCCGTC
GGCTCGACCG GACGAGCCAC CGGCCCGCAT CTGCACTGGG CCGTAACGCT CAACAATACC
CCGGTCGATC CGGAGCTTTT CCTCAGCAAA CCATAA
 
Protein sequence
MKLSHFALAL LISHATMAIA LPKNSAVPGG VAVIDLGPAS QTTPTARWGE QPIAVVRDNG 
RWFALLGIPL DTLPGDLEIR ISSGAATTTR QVAVQIKNYP EQRLTIKDKR KVEPNAEDLA
RIEREQKITE AIKKHFANSA PATDFTLPAS GPLSSRFGLR RIFNGQPRNP HAGLDVAVGT
GTPVKAPADG IIANTGDYFF NGNTVFIDHG QGLITAYMHL SRVDVRAGQT VKKGEALGAV
GSTGRATGPH LHWAVTLNNT PVDPELFLSK P