| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3426 |
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| Symbol | |
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| ID | 3568322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3676949 |
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| End bp | 3680938 |
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| Gene Length | 3990 bp |
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| Protein Length | 1329 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681898 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_286625 |
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| Protein GI | 71909038 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCGCC GTTGGACGTT TGAAAAGAAA CTTATGAAAA AACAGGACGC CGGACAAGGG
CGCGAAACTC CCACGGCCAT CGGCTTGACC AGCGACGCGC GTCGCCTGAG CAGCCTGAGG
GCCGAATTAC GCCGCTCGAG CGGTGAAAAA CAGCAAAAAC TGCAGGCCGA TCTGGCGGCA
TTGATCGAGC GTTCGCGCGC GGCGGTGCAG GAACGGCGCG CCAAGTTGCC GAAGCCGGAA
TTCCAGACCG ACCTGCCGGT CAATGAACGT CGGGCCGACA TTGCCGAGCT GATCGCCAAC
AATCAGGTGG TCATCGTTTG CGGTGAAACC GGCTCGGGCA AGACGACGCA GTTGCCGAAG
ATTTGTCTCG ATCTTGGCAT CGGGGCGCGC GGCCTGATCG GTCATACCCA GCCACGACGG
CTGGCGGCCC GTTCGGTGGC GACCCGGCTG GCGCAGGAGT TAAAGACGCA GGTTGGCGCC
GGCGTCGGCG TCAAGATCCG CTTCCACGAC AAATCGACAT CTGAGAGCTG GGTCAAGCTG
ATGACCGACG GCATCCTGCT CGCCGAATCG CAGTCCGATC CGTACCTGAA CGCCTACGAG
GCGATCATCA TCGACGAGGC GCACGAGCGC AGCCTGAACA TCGATTTCCT GCTCGGCTAC
CTGAAGCAGT TGCTGCCCAA GCGTCCGGAC CTGAAGCTGA TCATTACCTC GGCGACCATC
GATGCCGAGC GTTTCTCGCA GCATTTCAGC GCCCATGGCA AGTCGGCACC GGTGATCGAA
GTATCGGGCC GGCTCTTCCC GGTCGAAGTG CGCTATCGGC CGGTCGTCGA TATCGACAAG
AAGGATGACG AACGCGACCT GTACGACGCC ATTGTCGATG CGGCCGATGA GCTTTCCCGG
CTGGGCAGTG GCGATATCCT GGTCTTCCTG CCCGGCGAGC GGGAAATTCG CGAGGCGGCC
GAAGCCTTGC GCAAGCACGC GCTGGCCCGG CCGGGCCTGT CGAGTGCCCA TGCGCCGGAA
ATCCTGCCGC TGTTCTCGCG CCTTTCGGCC GGCGATCAGG ACCGCATCTT CAAGCCTTCG
GGCGGCCAGC GGCGCATCGT GCTGGCCACC AACGTGGCCG AAACCTCGCT GACTGTACCG
GGCATCCGCT ACGTGATCGA CACCGGCCTG GCGCGGGTCA AACGGTACTC CTACCGCAAC
AAGGTCGAGC AGTTGCAGGT CGAGCCGATC TCACAGGCCG CGGCGCGGCA GCGGGCCGGT
CGTTGCGGCC GGGTGGCGGC GGGTGTTTGC GTGCGCCTCT ACGACGAGGC TGACTTCAAT
GCCCGGGCGC CGTTCACTGA TCCGGAAATC CTGCGTTCCT CGCTGGCTGG CGTGATCCTG
CGCATGAAAT CGCTGAAGCT GACTGATGTC GAGAGCTTCC CGTTCATCGA ACCGCCGCCG
GCCAAGGCGA TCAGCGACGG CTACGCACTG CTCCAGGAAC TCGGCGGCTT GGACGACGAC
AATCGTCTGA CCAAAGTTGG CGACGCGCTG GCCAAGCTGC CGCTCGACCC GCGCATCGGC
CGCATGCTGG TCGCGGCGCG CGACCTCGGC TGCCTGAAGG AAGTCCTGAT CATTGCCGCC
GGCCTGTCCA CGCAGGACCC GCGCGAACGG CCGCAGGAGC GCCAGCAGGC CGCCGACGAG
AAGCACAAGC AGTTTGCCGA TGAGAAATCG GAATTCCTCA GCTGGGTGAA GCTGTGGGGC
TGGTTCCAGA ATGTCGTCGA GCACAAGAAA TCGAACAAGC AGCTGATCGA CAATTGCCAC
GCTCATTTCC TGTCCTACCT GCGTCTGCGC GAATGGCGCG AGGTCCATGG GCAACTGCAT
GCGATGGTCA CCGAACTGGG CTGGAAGGAA AACGATCTGC CCGGTACCTT TGATGCCATC
CATCAGGCGC TGCTGACCGG CCTGCTCGGC AACATCGGCT GCAAGTCGGA TGAATCCGGC
TACTACCTCG GGGCGCGCGG CATCCGTTAC TTGATCCACC CCTCGTCGCC GCTGCAGAAG
AAGGCCGGCA AGTGGATCAT GGCGGCCGAG ATCACCGAAA CAACACGCTT GTTCGGCCGC
TGCGTGGCCC GTATCGAAGC GGACTGGATC GAGAAAGTGG GCGCTCACCT TATCAAGCGC
CAATACTTTG ATCCGCACTG GGAAAAGAAG TCGATGCAGG TCGCCGGCTG GGAGCGGACG
ACGCTTTACG GCATCGTGAT CAACCCCAAG CGGCGCATCC ATTACGGCCC GCTGGCCCCG
GCCGAAGCGC GCGAGATTTT CATCCGCCAG GGGCTGGTCG GCGAGGAAAT CGACGAGTCC
TTCGCCAAGT GCTGGCCTTT TTTCCAGCAC AACCAGAAGC AGATTCGCGA CATCGAGAAG
ATCGAGCACA AGCAGCGTCG GCAGGACGTG CTGGTCGACG ACGAACTGAT CTTCGGCTTC
TACGACCACC TCATTCCCGA AGGCATCCAC AACGGCGCCA CCTTTGACCA CTGGCGCAAG
ACGGCCGAGC AGGAAAACCC GAAGCTGCTG TTCCTGTCGA AAGACGACCT GATGCGCCAC
TCGGCGGCAG GCGTCACCAC CGAAGCCTTC CCGCATCACA TCAAGGTGGG CGGCGTCGAG
TACGGGCTGA CCTACCATTT CGAGCCAGGT TCGCCGCGCG ATGGCGTGAC GCTGACCCTG
CCGCTGGCGC AGCTGAACCA GATTCCGGTG CTACGCATGG AATGGCTGGT GCCGGGGCTG
CTGAAGGAAA AGCTGGTGCA GCTGATCAAG ACGCTGCCGC AGAAGATCCG CGCCAAGCTG
GTGCCGGTGC CGGAGTTCGT CGAGGAATTC ATCGCGGCCA CCGCCGGCAA CGACAAGAAG
ATGAACCAGG GGCTGATCCC GCCGTTGATC GACTACATCC TCGAAGCGCG CGGCCTGAAT
GCCCGCGGCT GGGCGGTGAC GCCGGATGCT TTCCGGCCCG ATGCCCTGCC GCCGCACTTC
TCGATGAACT ACAAGCTGAT CGACGAACAC GGCCGACAGC TCGACATGAA CCGCAGCCTG
CTGGCTTTGC GTGGCGAGTG GGGCAAGGAG GCCAAGGAAG AGTTCGCCGA TTTGCACGAA
ACGCCGTCCG AATACACCCA ACTGACCGAC TGGACCTTCG GCGAACTGCC CGAATTGATG
GAGGTTCCGG TCGGCAAGCA GACGGTGATT GGCTATCCGG CGCTCTCCGA CGAGGGCGAA
ACGGTTAGCC TGAAGGTGTT CGATTCGGCC GAAGAGGCTG CCGAGACGCA TCGCAAGGGG
CTGGCCCGCC TGTTCATGCT GCAGTTCAAG GAGCAGGTGA GGTACTTCGA CAAGAACGTG
CCTGGCCTGA CCCAGATGGG CATGCAGTAC ATGCCGCTGG GCAGCACCGA CGAACTGAAG
CGCCAACTGG TCGACCTGAG TTTCGAACGC GCCTGCCTGA CCGAGCCGCT GCCGACCACG
CCGGAGGCGT TCAAGGCACG CTGCGCTGAA GCCAAGGCGC GGCTGGGATT GATCATGCAG
GAGGTTTGCC GCATGGTTGG TACCGTGCTG ACTGAATGGC AGGCGGTGAC CAAGAAGCTG
CCGGCTTTCA AGGCCCACGC CGCGGCGGTG GCCGACATCG AGGCGCAACT GAAGCGCCTG
CTCGGCAAGA ACTTCGTCGT CGATACGCCG TTCGAACGTC TGCAACATTA CCCGCGTTAC
ATGAAGGCGA TCGTGGTCCG CCTCGACAAG CTGAAGGCCA ACCCGGCCCG CGACGCCCAA
CTGATGGCCG AGTACGGGCC GCTGTGGAGC AACTACGAGC GCCGTGCCAT CCAGCTGGCC
AAGCTGGGTA CGCTCGACCC GCAGGTCGAG CAGTTCCGCT GGCTGCTGGA GGAACTTCGT
GTCGGCTTGT ATGCGCAGGA ACTGCGCACG CCAGTGCCGG TCTCCACCAA GCGGCTACAG
AAACAATGGG AAGGGATCAA GAATGGGTGA
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| Protein sequence | MFRRWTFEKK LMKKQDAGQG RETPTAIGLT SDARRLSSLR AELRRSSGEK QQKLQADLAA
LIERSRAAVQ ERRAKLPKPE FQTDLPVNER RADIAELIAN NQVVIVCGET GSGKTTQLPK
ICLDLGIGAR GLIGHTQPRR LAARSVATRL AQELKTQVGA GVGVKIRFHD KSTSESWVKL
MTDGILLAES QSDPYLNAYE AIIIDEAHER SLNIDFLLGY LKQLLPKRPD LKLIITSATI
DAERFSQHFS AHGKSAPVIE VSGRLFPVEV RYRPVVDIDK KDDERDLYDA IVDAADELSR
LGSGDILVFL PGEREIREAA EALRKHALAR PGLSSAHAPE ILPLFSRLSA GDQDRIFKPS
GGQRRIVLAT NVAETSLTVP GIRYVIDTGL ARVKRYSYRN KVEQLQVEPI SQAAARQRAG
RCGRVAAGVC VRLYDEADFN ARAPFTDPEI LRSSLAGVIL RMKSLKLTDV ESFPFIEPPP
AKAISDGYAL LQELGGLDDD NRLTKVGDAL AKLPLDPRIG RMLVAARDLG CLKEVLIIAA
GLSTQDPRER PQERQQAADE KHKQFADEKS EFLSWVKLWG WFQNVVEHKK SNKQLIDNCH
AHFLSYLRLR EWREVHGQLH AMVTELGWKE NDLPGTFDAI HQALLTGLLG NIGCKSDESG
YYLGARGIRY LIHPSSPLQK KAGKWIMAAE ITETTRLFGR CVARIEADWI EKVGAHLIKR
QYFDPHWEKK SMQVAGWERT TLYGIVINPK RRIHYGPLAP AEAREIFIRQ GLVGEEIDES
FAKCWPFFQH NQKQIRDIEK IEHKQRRQDV LVDDELIFGF YDHLIPEGIH NGATFDHWRK
TAEQENPKLL FLSKDDLMRH SAAGVTTEAF PHHIKVGGVE YGLTYHFEPG SPRDGVTLTL
PLAQLNQIPV LRMEWLVPGL LKEKLVQLIK TLPQKIRAKL VPVPEFVEEF IAATAGNDKK
MNQGLIPPLI DYILEARGLN ARGWAVTPDA FRPDALPPHF SMNYKLIDEH GRQLDMNRSL
LALRGEWGKE AKEEFADLHE TPSEYTQLTD WTFGELPELM EVPVGKQTVI GYPALSDEGE
TVSLKVFDSA EEAAETHRKG LARLFMLQFK EQVRYFDKNV PGLTQMGMQY MPLGSTDELK
RQLVDLSFER ACLTEPLPTT PEAFKARCAE AKARLGLIMQ EVCRMVGTVL TEWQAVTKKL
PAFKAHAAAV ADIEAQLKRL LGKNFVVDTP FERLQHYPRY MKAIVVRLDK LKANPARDAQ
LMAEYGPLWS NYERRAIQLA KLGTLDPQVE QFRWLLEELR VGLYAQELRT PVPVSTKRLQ
KQWEGIKNG
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