| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3408 |
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| Symbol | |
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| ID | 3568670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3659988 |
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| End bp | 3661187 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681880 |
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| Product | type II secretion system protein |
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| Protein accession | YP_286607 |
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| Protein GI | 71909020 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCG ACTACAAGGC AGTCAGCGTG GAAGGGCGAA TGACTTACGG GCGACTCGAC
GCGATCAATC TGGTCGACCT CGAAATGCGC CTCAAGCGCA TGAGTCTCGA TCTGGTCACC
GGCAACCCGA TCCAGCACCG CGCCCTTTTC GGCACCCGGA GCGTGCCGCG TCCGGAACTG
ATCAATTTCT GTTTCCATCT CGAACAGTTG ACCCGGGCGG GCGTCCCGAT CCTCGAAGGG
CTGACCGACC TGCGCGACTC GATCGAACAC CCGCGATTTC GCGAGGTGAT GGCCGGGCTG
ATCGAAAGTA TCGAGGGTGG GCAAACACTG TCGCAGGCGA TAGCTGAACA CCCGGACATC
TTCAGCCAGG TTTTCGGCAA CCTGATCCGG GCCGGCGAAT CGAGCGGGCA ACTGCCTGAC
GTACTGGCTT CCCTGACCGA ATCGCTGAAG TGGGAAGACG AACTGGCCTC GCAGACCAAG
AAACTGCTGA TGTACCCGGC CTTCGTGGCC ACCATCGTGC TGTCAGCCAC CTTCTTCCTG
ATGATCTACA TGGTCCCGCA GCTCAAGCTG TTCGTGAAGA ACATGGGCCA CGTCCTGCCG
CCGCACACCA AACTGCTGTT CTTCATTTCC GACCTGCTGG TCGACTACTG GTACGTTTTC
CTGCTGCTAC CCATTATCGC CGTCATCGCC GGCCAGCTGA TCCTGCGCGG CAATCCGCTG
GCCCGCCTGC GTCTCGACGG CATCAAGCTG CGCCTGCCAG TGGTCGGTCC GATCCTGAAG
AAAATTATTC TGGCCCGTTT TTCCAGTACA TTCGCCATGC TCTACGCCTC CGGAATTCCT
GTGCTCGAAT CGATCCGCTC GACTCAGAAC GTCGTCGGCA ACCGTGTCGT TCGCCGGGCG
CTGGAGCGGG TCGAACAGTC GATCCGCGAA GGCCAGAATG TGGCCGGTGC CTTCCGCGAT
GTCGGGCTGT TCCCACCGCT TGTCGTCCGC ATGCTGCGTA TCGGTGAAAG TACCGGCGGT
CTCGACAAGG CACTGCTCAA CGTCAGCTAT TTCTACAACC GCGACGTCAG AGAATCGGTC
GGCAAGGCAC AAGCCCTGAT CGAGCCGATG CTGACCCTGT TCATGGGCGC CCTGCTCGGC
TGGATCATGC TGTCGGTCAT CGGACCCATC TACGACGTCA TCAGCAAGAT CAAAACGTGA
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| Protein sequence | MLFDYKAVSV EGRMTYGRLD AINLVDLEMR LKRMSLDLVT GNPIQHRALF GTRSVPRPEL
INFCFHLEQL TRAGVPILEG LTDLRDSIEH PRFREVMAGL IESIEGGQTL SQAIAEHPDI
FSQVFGNLIR AGESSGQLPD VLASLTESLK WEDELASQTK KLLMYPAFVA TIVLSATFFL
MIYMVPQLKL FVKNMGHVLP PHTKLLFFIS DLLVDYWYVF LLLPIIAVIA GQLILRGNPL
ARLRLDGIKL RLPVVGPILK KIILARFSST FAMLYASGIP VLESIRSTQN VVGNRVVRRA
LERVEQSIRE GQNVAGAFRD VGLFPPLVVR MLRIGESTGG LDKALLNVSY FYNRDVRESV
GKAQALIEPM LTLFMGALLG WIMLSVIGPI YDVISKIKT
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