Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3407 |
Symbol | |
ID | 3568669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3658279 |
End bp | 3659985 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637681879 |
Product | type II secretion system protein E |
Protein accession | YP_286606 |
Protein GI | 71909019 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTA CCGCCCTCCA GCGCCGCCCC CTCGGCCAGA TCCTGATCTC CGAAGGTATC CTGTCGGAAG ATCAACTGCG CATCGCGCTG CTGGAGCAGA TGAAGCAAAA CCAGCCAATC GGCAAATTGC TGGTTTCGCT GGGTTTTGTG ACTGAAGCCA CCTTGCGGCA GGCGCTGTCG GAAAATCTCG GCAAGCAGAG CATTGACCTG TCGCACGCCG TGATCGACCC GCAGGCGCTG AAACTGGTGC CGCGCGACTT GGCCAAGCGT CACCACCTTC TGCCGCTGGA TTACGACCGG ACCAACCGCC GACTGGCGCT GGCCATCTCG GATATCAACG ACATCGTCGG CCTGGACCGC GTGCGCTCCC AACTGGAGGA AGGCACCGAA ATCGAGACGC TGCTCGCCGG TGAATCGGAA ATCGACCACG CCATCGACCA GTATTACGGT CACGAATTGT CGATCGACGG CATCCTGCAC GAGATCGAAA CTGGCGAGAT CGACTGGCAC AGTCTTTCAG CCACCGACAA TGAATACAGC CAGCCAGTCG TCCGCCTGAT CGATTCGATC CTGACCGATG CCGTCAAACG CGAGGCTTCG GACATCCACT TCGAGCCGGA AGCCAACTTC CTGCGCATCC GTTACCGCAT CGACGGCATG CTGCGCCAGA TCCGCGCCCT GCATAAGTCC TATTGGCCGG CGATGACGGT CCGCATCAAG GTGCTGTCCG GCATGAACAT TGCCGAAATG CGCGCCCCGC AGGATGGCCG GATCAGCCTG ACGGTTTCCG GGCGCCCGAT TGATTTTCGC GTCGCCAGCC AGCCGACCAT CCACGGCGAG AACATCGTGC TGCGCATTCT CGACCGCCAG AAGGGCATCG TGCCACTGGA GGGACTCGGC TTGGCCGAGG AGCATCTGCA CCAGTTGAAG CTGATGATTT CCCGGCCCGA AGGCATCATC CTCGTCACCG GCCCGACCGG CAGCGGCAAG ACGACGACGC TTTACTCGGT GCTGAACCAC ATCAACGCCG AGGGCATTCA CATCATGACC CTCGAAGACC CGGTCGAGTA TCCGATGGCG ATGGTGCGCC AGACCTCGGT CTCCGAAACT GCCAAGCTCG ATTTTGCCAA CGGCATCCGC TCGATGATGC GACAGGATCC GGACGTCATT CTGGTCGGTG AAGTACGCGA TTCTGAAACG GCAGAAATGG CTTTCCGCGC CGCGATGACA GGCCATCAGG TGTACACGAC CCTGCACACC AACTCGGCCA TCGGCGCCGT GCCGCGCCTG CTCGACATTG GCGTACTGCC CGACATCATG GCCGGCAACA TCATCGGCAT CGTGGCCCAA CGCCTGATCC GCCGCCTGTG CGAGCACTGC AAGTCGCCCT ACCACGCCGA ACCGCACGAA ATCCGCCTGC TCGGACCACA GGGAGAAGGA ACGCGTCCCG TGCTATTCCG GCCGACCGGC TGCGAACTGT GCGATTTCCA GGGCTATCGT GGCCGTCTGG CGATCATGGA ACTGTTGCGC ATCGACGCCG GCATTGACGA TCTGATTGCC CGTCGCGCCA CCACCCATGA AATCCGTAGC CGCGCCCTGC TCCAGGGTTT CACCACGCTG GCCGACGATG GCATGCGGCG GGTGCTCAAC GGCACGACCT CGCTCGAAGA ACTCGCCCGT GTCGTCGACC TAACCGACCG GATGTAA
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Protein sequence | MSTTALQRRP LGQILISEGI LSEDQLRIAL LEQMKQNQPI GKLLVSLGFV TEATLRQALS ENLGKQSIDL SHAVIDPQAL KLVPRDLAKR HHLLPLDYDR TNRRLALAIS DINDIVGLDR VRSQLEEGTE IETLLAGESE IDHAIDQYYG HELSIDGILH EIETGEIDWH SLSATDNEYS QPVVRLIDSI LTDAVKREAS DIHFEPEANF LRIRYRIDGM LRQIRALHKS YWPAMTVRIK VLSGMNIAEM RAPQDGRISL TVSGRPIDFR VASQPTIHGE NIVLRILDRQ KGIVPLEGLG LAEEHLHQLK LMISRPEGII LVTGPTGSGK TTTLYSVLNH INAEGIHIMT LEDPVEYPMA MVRQTSVSET AKLDFANGIR SMMRQDPDVI LVGEVRDSET AEMAFRAAMT GHQVYTTLHT NSAIGAVPRL LDIGVLPDIM AGNIIGIVAQ RLIRRLCEHC KSPYHAEPHE IRLLGPQGEG TRPVLFRPTG CELCDFQGYR GRLAIMELLR IDAGIDDLIA RRATTHEIRS RALLQGFTTL ADDGMRRVLN GTTSLEELAR VVDLTDRM
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