Gene Daro_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3395 
Symbol 
ID3567125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3647042 
End bp3647794 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content56% 
IMG OID637681867 
Producthypothetical protein 
Protein accessionYP_286594 
Protein GI71909007 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCT TCCTGACGCT TTTCGAGAAG GAATTCCTGC GTTTCTGGAA GGTCAGCTTC 
CAGACCGTCG CGGCACCGGT GCTGACGGCC TTGCTCTATC TGCTGATTTT CGGTCATGTG
CTCGACGAGC ATGTTCTGGT CCATGGCGTG CGCTACACCA GCTTCCTGAT ACCCGGTCTG
GTCATGATGC AGGTGCTGCA GAATGCTTTT GCCAATTCGT CATCGAGCCT GATTCAGGCC
AAGATCACCG GTTCGATTGT CTTCGTGCTG CTGCCGCCGA TTCCCTATAG CGCTTTCTTC
GCCGCCTATG TGCTGGCAGC CATGGTCCGT GGTTTGCTGG TCGGCGTCGG CGTGTTGGTG
GCAACCGTCT GGTTCGCCGA GTTGAGGGTG GTGGCGCCCC TGTGGATTCT GGTCTTTTCT
GTCTTGGGCG GTGCGCTGTT CGGGGCGCTC GGCATGATCG CCGGTATCTG GTCCGAAAAG
TTCGATCAGC TGGCCGCCTT CCAGAATTTT CTGATCATGC CGCTGACCAT GTTGTCCGGT
GTTTTCTATT CGATTTACAC CTTGCCTGCA TTCTGGCAGC GCGTGTCGCA TTACAATCCC
GTCTTTTACA TGATCGATGG CTTCCGTTAT GGCTTTTTTG GTGTCTCCGA TGTGGCGCCT
GAAATCAGTC TGGCGGTGGT CGTTACCTGC TTCGCCGCCG TGTCCGTAGT GACTTTGAAC
CTGCTGAAGC GGGGCTGGAA GCTGAGAGGC TGA
 
Protein sequence
MIGFLTLFEK EFLRFWKVSF QTVAAPVLTA LLYLLIFGHV LDEHVLVHGV RYTSFLIPGL 
VMMQVLQNAF ANSSSSLIQA KITGSIVFVL LPPIPYSAFF AAYVLAAMVR GLLVGVGVLV
ATVWFAELRV VAPLWILVFS VLGGALFGAL GMIAGIWSEK FDQLAAFQNF LIMPLTMLSG
VFYSIYTLPA FWQRVSHYNP VFYMIDGFRY GFFGVSDVAP EISLAVVVTC FAAVSVVTLN
LLKRGWKLRG