| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3391 |
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| Symbol | |
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| ID | 3567121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3643970 |
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| End bp | 3644989 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681863 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_286590 |
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| Protein GI | 71909003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA GAACCTTCAT CGCCGCCGCT GTGGCTACCA CCCTGTTGAG TGCCAGCGCA
GTTCAGGCGC AGACTTATCG AGCTGAATAT CGTCTGTCGA CGACGCTCGG TACGGCATTT
CCCTGGGGGC AGGCCGGTGA GCGCTGGATT GAACTGGTCA AGGAAAAAAC GCAAGGCCGC
ATCGTCATCA AGCTCTACTC GGGCAACTCG CTGGTCGGTG GTGACCAGAC GCGCGAATTC
ACGGCGATTC GCCAGGGCGT GATCGACATG TCCATCGGTT CGACCATCAA CTGGTCGCCG
CAGGTCAAAG AACTGAACCT GTTTTCGCTG CCCTTCCTGA TGCCGGATTA CAAGGCGATT
GATGCTTTGA CCCAAGGCGA GGTCGGCAAG GATTTGTTTG CTGTCCTGGA GAAGCGCGAA
GTCGTGCCGC TGGCCTGGGG TGAGAACGGC TTCCGCGAAA TGTCCAACTC CAAGCGGCCG
ATCGCATCGC CGGCTGACAT GAAGGGTATG AAGTTCCGTG TCGTCGGCTC CCCTCTCTAC
AACGAAACCT TCTCGGCACT TGGTGCGAAC CCGACCCAGA TGAGCTGGGC GGATGCCCAG
CCGGCGCTGG CTTCCGGCGC TGTCGATGGC CAGGAAAATC CGCTGTCCGT GTTCGTGGCT
GCCAAGCTGC CGACGGTTGG CCAGAAATAC CTGACCTTGT GGCATTACGT GGCAGACCCG
CTGATCTTCG TCGTCAACAA GCAGGTCTGG GCCAGCTGGA CACTCGCCGA TCGCGAGGCG
GTGAAGCAGG CGGCATTGCA GGCAGGGCGT GAAAACATTG AAAAGGCGCG CAAGGGTATT
GCCGGCAATG ACAACACCGT CCTCAAGCAG ATCGAAGCGG CCGGCGTAAC TGTGACCAAT
CCGACTGCCG AGCAGCGTAA CGCCTTCGTT CAGGCTACGC GCCCGGTTTA CGACAAGTGG
TCGAAGACCA TTGGCGCAGA TCTGGTCAAG AAGGCCGAAA CCGCCATCGC CAAGCGCTGA
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| Protein sequence | MLRRTFIAAA VATTLLSASA VQAQTYRAEY RLSTTLGTAF PWGQAGERWI ELVKEKTQGR
IVIKLYSGNS LVGGDQTREF TAIRQGVIDM SIGSTINWSP QVKELNLFSL PFLMPDYKAI
DALTQGEVGK DLFAVLEKRE VVPLAWGENG FREMSNSKRP IASPADMKGM KFRVVGSPLY
NETFSALGAN PTQMSWADAQ PALASGAVDG QENPLSVFVA AKLPTVGQKY LTLWHYVADP
LIFVVNKQVW ASWTLADREA VKQAALQAGR ENIEKARKGI AGNDNTVLKQ IEAAGVTVTN
PTAEQRNAFV QATRPVYDKW SKTIGADLVK KAETAIAKR
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