Gene Daro_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3390 
Symbol 
ID3567120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3643477 
End bp3643962 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID637681862 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_286589 
Protein GI71909002 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATA ACAATAATGC CGCCGCTTCA GGCGGCAAGC TGACGCTCGC CACGGTCGAA 
CGTGTTCTGA TGGCCGCGTC AATGGGGCTT CTGTGCCTGC TGACCATGGC CAACGTGCTG
GTACGCTACT TCACCGATAT TTCCTTTGCG TTCACCGAGG AGATTTCAGT AGCCTTGCTG
GTGGTGATGA CACTGATTGG CGCTTCGCAT GCCTTTGCTA CCAATCATCA CATTGCGATT
ACATTTTTTG TCGATCGCTG GCCAAAGTTG CTGGGCGTTG CTCGCCGGTT TGCTGCGCTC
TGCTCGTTGG TGATGTTTGG CTTGCTGGCC TGGTATGGCG TTTCGATGGC TTGGGATGAC
TACAATTTCG AGGTCACGTC GCCATCGCTG GGCGTGCCGC AGTGGTGGTA CACCGTCTGG
TTGCCAGTGC TTTCCATCGT GATTGTCATG CGCTTGCTGG CGCTGCTTTG GCGAGGGGCG
AAGTGA
 
Protein sequence
MSDNNNAAAS GGKLTLATVE RVLMAASMGL LCLLTMANVL VRYFTDISFA FTEEISVALL 
VVMTLIGASH AFATNHHIAI TFFVDRWPKL LGVARRFAAL CSLVMFGLLA WYGVSMAWDD
YNFEVTSPSL GVPQWWYTVW LPVLSIVIVM RLLALLWRGA K