Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3390 |
Symbol | |
ID | 3567120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3643477 |
End bp | 3643962 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637681862 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_286589 |
Protein GI | 71909002 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATA ACAATAATGC CGCCGCTTCA GGCGGCAAGC TGACGCTCGC CACGGTCGAA CGTGTTCTGA TGGCCGCGTC AATGGGGCTT CTGTGCCTGC TGACCATGGC CAACGTGCTG GTACGCTACT TCACCGATAT TTCCTTTGCG TTCACCGAGG AGATTTCAGT AGCCTTGCTG GTGGTGATGA CACTGATTGG CGCTTCGCAT GCCTTTGCTA CCAATCATCA CATTGCGATT ACATTTTTTG TCGATCGCTG GCCAAAGTTG CTGGGCGTTG CTCGCCGGTT TGCTGCGCTC TGCTCGTTGG TGATGTTTGG CTTGCTGGCC TGGTATGGCG TTTCGATGGC TTGGGATGAC TACAATTTCG AGGTCACGTC GCCATCGCTG GGCGTGCCGC AGTGGTGGTA CACCGTCTGG TTGCCAGTGC TTTCCATCGT GATTGTCATG CGCTTGCTGG CGCTGCTTTG GCGAGGGGCG AAGTGA
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Protein sequence | MSDNNNAAAS GGKLTLATVE RVLMAASMGL LCLLTMANVL VRYFTDISFA FTEEISVALL VVMTLIGASH AFATNHHIAI TFFVDRWPKL LGVARRFAAL CSLVMFGLLA WYGVSMAWDD YNFEVTSPSL GVPQWWYTVW LPVLSIVIVM RLLALLWRGA K
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