| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3389 |
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| Symbol | |
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| ID | 3567119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3642197 |
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| End bp | 3643477 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681861 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_286588 |
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| Protein GI | 71909001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGC TGCTCTTCGG GATTTTTATT GCGCTGATGC TCTCCGGCGT GCCGCTTGCG
GTTGCCATGG GGCTGGCTGG CATTGCGGTG GTTGCGGTCG CCGATCTTGG CATGATGTCC
TTGCCGACCA ACGTTTATAC CGGTATTGCC AAATATCCGT TGATGGCGAT TCCGGTTTTC
GTGATCGCTG GTCTGATCTT CGAAAAGGCC GGTGTTGCTG CCACCATCGT GCGTTTTGCC
TCGGCGCTGG TCGGGCAGCG GCGTGGCAGC TTGGCCATAG TCGCTATTCT GGTGGCGATG
ATCCTGGGCG GGATTTCCGG TTCCGGGCCA GCCGACTCGG CGGCCGTTGG TGCCGTGATG
TTGCCGTCGA TGCTGAAGGC TGGTTATCCG CGCTCTTTCA CGGCTGGTGT CATTGCAGCA
GCCGGTTCGA CCGATATCCT GATTCCGCCG TCCATAGCCT TCGTGATCTA CAGCCTGCTG
GTGCCACAGG CATCCGTGCC GGCGCTGTTC GCGGCCGGCA TGATTCCCGG TATTTTGTCA
GGATTGACCT TGATTCTGGT TGCCTGGTGG CTGTCGGTAA AAAACAATTT CGAAGCCGAG
CCGGCCGAGC CACGGCCGCC ATTCTGGCAA AGCCTGAAGG CAGCTGGCTG GGGATTGCTA
GCGCCGGTCA TCATCCTGGG CGGCATGCGC AGCGGCTTCT TCACGCCGAC TGAAGCTGCT
GTGGTGGCGG TGTTCTATGG CCTGATTGTC GGCATGGTGA TCTACCGGAC GCTGACCTGG
AAGGATGTGT ACATCGTGCT GGTCGAGTCG GCCGAGATTT CCTCGGTGAT CCTGACCGTC
GTGGCGCTGG CCAGCGTTTT TGCTTGGGGC AGCAATACGC TTGGTACCCT CGATCACCTC
GCTGCGGCCT TGCTCGGCAC TGGTCTCTCG GAAATTCCGA TGCTGCTCAG CATCCAGCTC
TTGCTGCTGA TCGCTGGCAT GTTCCTCGAT GCCATATCGA TCTACTTCAT TTTCCTGCCG
CTACTGGTGC CGATTGCCAT GCATTTCAAC TGGGATCTGG TCTGGTTCGG CGTGATCATC
ACGATGAATA TGGCGCTTGG CCAGTTCCAT CCGCCGCTCG GCGTCAATCT GATGGTGACT
TGCCGCATGG CCGGGGTCTC GATGGAATCG ACCGTGCCCT GGGTATTGTG GATGGTGGCG
GCGATGGCGG GGACGATGTT CCTGGTGACA TTTGTGCCGG AATTGGCGCT TTGGTTGCCG
CGTCACCTCG GGTATCTGTA A
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| Protein sequence | MDWLLFGIFI ALMLSGVPLA VAMGLAGIAV VAVADLGMMS LPTNVYTGIA KYPLMAIPVF
VIAGLIFEKA GVAATIVRFA SALVGQRRGS LAIVAILVAM ILGGISGSGP ADSAAVGAVM
LPSMLKAGYP RSFTAGVIAA AGSTDILIPP SIAFVIYSLL VPQASVPALF AAGMIPGILS
GLTLILVAWW LSVKNNFEAE PAEPRPPFWQ SLKAAGWGLL APVIILGGMR SGFFTPTEAA
VVAVFYGLIV GMVIYRTLTW KDVYIVLVES AEISSVILTV VALASVFAWG SNTLGTLDHL
AAALLGTGLS EIPMLLSIQL LLLIAGMFLD AISIYFIFLP LLVPIAMHFN WDLVWFGVII
TMNMALGQFH PPLGVNLMVT CRMAGVSMES TVPWVLWMVA AMAGTMFLVT FVPELALWLP
RHLGYL
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